Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0060 ATGAAGATTCAGTGTGATGTGTGTGACAAGGCCGAGGCCTCTCTATTCTGTCCTGCAGATGAAGCAGCTCTCTGCCACAGCTGCGACCGCACAATCCACCGCGCCAACAAGCTCGCAACCAAACACACGCGCTTCAATCTCCACCACCCCTCCTCTTCTAAGGACACGCCTCGCTGCGATATCTGCCAAGAGAGGCGTGCGTATCTGTTCTGCCAAGAAGACAGAGCAATACTTTGCAGAGAATGCGACCTTCCAATACACAGAGCCAACGAACATACGCAGAAGCACAACAGGTTCCTTCTCACCGGCGTCAAGCTCTCCGGCACTTGTTTGGAGTTGGACCCTCCTGCTGCTTCCTCATCCACCGCCGCCGTCAATAACAGTAACGCCTCTGAGGCTCGAATTAGAAGCAGCTCCTCCTCTCGTTCTTCCCATTATTGCAAGGCTGATGAAGACAACACGGTCGCTAGCGACACTGCTTCAGTTTCAACGAGTAGTATATCCCAATACTTGATTGAGACAATTCCTGGTTTCTGTTTCGAAGACCTTCTCGACGCTTCATTTGCACCTAATGGTTTCTGTAAGAATAAAGATCGATGTTCGGATTTTCAGGACCAAGATCTTGATGACAGTGCGCGTGTATTTCCACTGGCAACATCGTGGATTCCTCAAACTCATTCTCATCAGTTTGAAGTTGAAGGCCAATCCCCTGAACTCAGCAGCACTTCAATTGTTTCTCAGATTGGTTCTGTGGTTAAGGGAATAACGAAAACGAACACTGTCCAAGAGAGCTGGAAATGGATAGAGAGATACTCTATTCCTCAATTGATAAGAAATTCTAGATAG 846 0.4823 MKIQCDVCDKAEASLFCPADEAALCHSCDRTIHRANKLATKHTRFNLHHPSSSKDTPRCDICQERRAYLFCQEDRAILCRECDLPIHRANEHTQKHNRFLLTGVKLSGTCLELDPPAASSSTAAVNNSNASEARIRSSSSSRSSHYCKADEDNTVASDTASVSTSSISQYLIETIPGFCFEDLLDASFAPNGFCKNKDRCSDFQDQDLDDSARVFPLATSWIPQTHSHQFEVEGQSPELSSTSIVSQIGSVVKGITKTNTVQESWKWIERYSIPQLIRNSR* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0060 281 CDD Bbox1_BBX-like 5 45 - -
Aev08g0060 281 ProSiteProfiles Zinc finger B-box type profile. 54 101 IPR000315 GO:0008270
Aev08g0060 281 CDD Bbox1_BBX-like 59 101 - -
Aev08g0060 281 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 201 - -
Aev08g0060 281 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 201 - -
Aev08g0060 281 SMART bboxneu5 4 47 IPR000315 GO:0008270
Aev08g0060 281 SMART bboxneu5 54 101 IPR000315 GO:0008270
Aev08g0060 281 MobiDBLite consensus disorder prediction 116 137 - -
Aev08g0060 281 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Aev08g0060 281 Gene3D Classic Zinc Finger 1 101 - -
Aev08g0060 281 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Aev08g0060 281 Pfam B-box zinc finger 56 93 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0060 Aev-Chr8 345879 346919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0060 1 198 C2C2-CO-like Transcription Factor Family AT1G75540 50.943 3.26e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Aev08g0060 zf-B_box 8.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0060 - - gmx:100786372 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0715 07 4640378 4642013 Aev08g0060 08 345879 346919 PCT