LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev08g0055	ATGGAAATTGCCAAAGCGTTCAAACAAAGCTCGAGAGAGTTCTTTTTCCAGCAAGCACTTGGCGACGAGATTTTCTGCGTGAACGCCAACAACGTGGTGGTTGGTGGTGACGATTTCTCCGTCGACGACCTCCTCGACTTATCCAACGGCGATTTACAACACGCTTCCCTTCACTACGAACACCTCCAACAACAATACAGCGAAGAAAAAGACAGCTCATCCTTTTCTTCGCAGTCACAAGAAGATAGCAACTCATATTCCGCCGGAGTTTCCATTTTTTCCGACGAATTAGCCGTTCCGAACGATGATTTGGCGGAGTTAGAGTGGGTTTCTCACTTTGTGGACGATTCTCTTCCAGAGCTCTCTCTTCTGTACCCAGTAAGGCCTGACCAGCCCAAAACCCGGCCCGAACCGAAGCCCAGAGCGTCCTCGGTTCAGAGAACTCCTCGTTTTCCCTCCGTGACGAAAGTCCTCACCAAGGCGAGAACCGAAAAGAACAGAAAACCCAACGCTCGCGCGTGTTTATTTATAACGCCGTTGCTCTCGCGTCCGTCCTCGCCGTCGTCGTGTTCCTCCTCCGTCGTCTCGTCAACGGCCCAGCAGCCGCCGGCGAAGAGACAGAAGAAACGAGCCGATGCCCAAGAAGAGGGTGGGGCCCAGGCCCAGGCCCAGCTGCAGAGACGGTGCAGCCATTGCCAGGTGCAGAAGACGCCTCAGTGGAGGACGGGCCCACTAGGCCCAAAGACTCTCTGCAACGCGTGCGGGGTTCGGTTCAAGTCGGGTCGGCTTTTTGACGAGTACAGACCGGCGTGCAGCCCAACCTTCTCGAGCGAAATTCACTCCAACAGCCACCGTAAGGTGTTGGAGATGAGGAAGAGGAAGGGAATGGTTGGACCGGATACCGGTTCGGTTCAGTCTCATTTGGTTCCTACTTGCTGA	939	0.5463	MEIAKAFKQSSREFFFQQALGDEIFCVNANNVVVGGDDFSVDDLLDLSNGDLQHASLHYEHLQQQYSEEKDSSSFSSQSQEDSNSYSAGVSIFSDELAVPNDDLAELEWVSHFVDDSLPELSLLYPVRPDQPKTRPEPKPRASSVQRTPRFPSVTKVLTKARTEKNRKPNARACLFITPLLSRPSSPSSCSSSVVSSTAQQPPAKRQKKRADAQEEGGAQAQAQLQRRCSHCQVQKTPQWRTGPLGPKTLCNACGVRFKSGRLFDEYRPACSPTFSSEIHSNSHRKVLEMRKRKGMVGPDTGSVQSHLVPTC*	313

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aev08g0055	312	PIRSF	Txn_fac_GATA_plant	10	310	IPR016679	GO:0003677\|GO:0005634\|GO:0045893
Aev08g0055	312	Pfam	GATA zinc finger	229	262	IPR000679	GO:0006355\|GO:0043565
Aev08g0055	312	Gene3D	-	219	295	IPR013088	GO:0006355\|GO:0008270
Aev08g0055	312	SUPERFAMILY	Glucocorticoid receptor-like (DNA-binding domain)	221	285	-	-
Aev08g0055	312	MobiDBLite	consensus disorder prediction	126	154	-	-
Aev08g0055	312	MobiDBLite	consensus disorder prediction	182	222	-	-
Aev08g0055	312	CDD	ZnF_GATA	228	285	IPR000679	GO:0006355\|GO:0043565
Aev08g0055	312	PANTHER	GATA TRANSCRIPTION FACTOR	3	312	-	-
Aev08g0055	312	ProSitePatterns	GATA-type zinc finger domain.	229	254	IPR000679	GO:0006355\|GO:0043565
Aev08g0055	312	ProSiteProfiles	GATA-type zinc finger domain profile.	223	259	IPR000679	GO:0006355\|GO:0043565

Showing 1 to 10 of 13 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev08g0055	Aev-Chr8	296661	297697	Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev08g0055	38	294	C2C2-Gata Transcription Factor Family	AT4G36240	45.627	3.40e-54	175

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2C2-GATA	Aev08g0055		GATA	3.5e-16	CL0167

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev08g0055	-		-	gmx:100780311	313.923

Showing 1 to 1 of 1 entries