Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0043 ATGGGTGGTGTAAGGAAATCAAGCAGCAATGGAAGAGTGCTGAAGCAAATCCTGAAGAGGTGTTCGAGCTTAGGGAAGAAGAATAGTAGGAATGGGTATGATCCCGTAGATGTCCCAAAAGGGCACTTCGCCGTATACGTTGGAGAGAACAGGAGTAGGTACATTGTCCCAATCTCATTCTTGACCCACCCACAGTTCCAATCCCTCCTCCGCCAGGCTGAAGAAGAATTCGGCTTCCATCACCACATGGGCCTTACCATTCCTTGTGACGAACTTCTTTTCAGATCCCTAACATCCATCCTCCTCACATAA 312 0.4808 MGGVRKSSSNGRVLKQILKRCSSLGKKNSRNGYDPVDVPKGHFAVYVGENRSRYIVPISFLTHPQFQSLLRQAEEEFGFHHHMGLTIPCDELLFRSLTSILLT* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0043 103 Pfam Auxin responsive protein 30 101 IPR003676 GO:0009733
Aev08g0043 103 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 101 IPR003676 GO:0009733
Aev08g0043 103 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 10 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0043 Aev-Chr8 223881 224192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0043 14 101 Calmodulin-binding Proteins AT4G34750 49.438 2.63e-22 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0043 K14488 - gmx:100805634 156.762