Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0009 ATGTTAATACAAAGTTCACTTCTGAGTTCAGTTGAAGCTGGTCTATGTTATGTATCTGATGATGGGAAAGATATTCTGTGTGACGTGCCTGGTGGTCAAACTTGGCAGGTGTGCCAGAAATGCAACAAGTGCCCCCTTGACTGGTGTAGAAAAGCGAAATCAATTGAAGAGGATAGAAGGAATGCTGATAATCTTTGCATCTCAAACTGTTTAAGTGGGTTAGGTCAGCCATCAACTGCAAGTATAATGACTGATAATACACCACCTAACATGGTATACAGGAGAAAGAAGCTACGTATGGGCTCAAATGCCCCACTTATCAAGCTAGGACCAATGAATGTGCAGAAAAGTCCCAATTACCCTTCAGTCATAAGTTCATCTTCGCATTTAGCATCAGCTGAGGATCAGCCAGTTGTTTTTCAAGTTAAGGATGAAATTGAAATGGTTACAGATCCTGTTGTTCATTCTCTCTTATGCAATGGAGTAGCTAAAGATAACATGCAGAAAAATTTAGGTATTGACAGTGTAAATGACAGTTGCTCCTCTTCAAAATCAAATATGGAACTCGTTTCAGATTCAATGGAAACTGAAATTGATGAAACTGGTGAATGCTCCTCATCTAGTGCAATAGTTATCGATGTCACGAGGGAAGAAGTAACGGAAAAGGATTTCTGCATGAATATTCTAAGAAGCTATGGACTTCTTGGACAAGATTCTTTAGCAGATAATGTTCCCTCTGCAGAAGATGTTGTTACCACTGGTAATAGCTTCTGTTCTAGGTCATGCAAAACATGTGGACAATTGGACAGTTCATTGAACATGCTTTTATGTGATCATTGTGAAGATGCATATCATCCATCTTGCTACAATCCACGCTTGAAAAAACTACCAATTGATGAGTGGTTTTGTCATTCATGTCTCAAAAGAAGGCAGAAAATTCTCAAGGAGACAATCATCAAATCACCAGGTATCCACATTGAACTTGGAAAATGTAGAACTACGTCAGTTAAAGCTGAATTGAATCCCATACTGTTGATGCTCAGAGACACTGAGCCATATGCAACGGGTGTGCGGGTTGGGAAAGGTTTTCAAGCAGAAGTTCTGGACTGGTCAGGCCCAATAGGAAGTGATGAAGATGAACTTCCTGAGCCATTGGAAATCAATTCTTCAGAAATTTCTAGTATGCAGGAAGAGAATCAAAGAAATCCAACTAGACTCAGTTCCATTGGTAATTGGCTTCAGTGCAGAGAAATTATAGATAGAGCCAACAGAACCATGTGTGGAAAATGGCGCAGAGCCCCACTTTTCGAAGTTCAAACTGATGATTGGGAGTGCTTCTGTGCTATCCATTGGGATCCATCTCATGCTGATTGTGCAGTACCTCAGGAGCTTGAAACAGAACAAGTTCTAAAGCAACTCAAGTATATAGAAATGCTAAGACCTCGACTTACAGCGAAAGAGAGAAAATTAGATTGCAAAAATAGTGGTGATTGA 1494 0.3996 MLIQSSLLSSVEAGLCYVSDDGKDILCDVPGGQTWQVCQKCNKCPLDWCRKAKSIEEDRRNADNLCISNCLSGLGQPSTASIMTDNTPPNMVYRRKKLRMGSNAPLIKLGPMNVQKSPNYPSVISSSSHLASAEDQPVVFQVKDEIEMVTDPVVHSLLCNGVAKDNMQKNLGIDSVNDSCSSSKSNMELVSDSMETEIDETGECSSSSAIVIDVTREEVTEKDFCMNILRSYGLLGQDSLADNVPSAEDVVTTGNSFCSRSCKTCGQLDSSLNMLLCDHCEDAYHPSCYNPRLKKLPIDEWFCHSCLKRRQKILKETIIKSPGIHIELGKCRTTSVKAELNPILLMLRDTEPYATGVRVGKGFQAEVLDWSGPIGSDEDELPEPLEINSSEISSMQEENQRNPTRLSSIGNWLQCREIIDRANRTMCGKWRRAPLFEVQTDDWECFCAIHWDPSHADCAVPQELETEQVLKQLKYIEMLRPRLTAKERKLDCKNSGD* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0009 497 ProSiteProfiles Zinc finger CW-type profile. 406 466 IPR011124 GO:0008270
Aev08g0009 497 ProSiteProfiles Zinc finger PHD-type profile. 259 309 IPR019787 -
Aev08g0009 497 PANTHER HISTONE ACETYLTRANSFERASE 30 490 - -
Aev08g0009 497 Gene3D - 410 475 - -
Aev08g0009 497 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 322 IPR013083 -
Aev08g0009 497 Pfam PHD-finger 262 307 IPR019787 -
Aev08g0009 497 PANTHER REMODELING AND SPACING FACTOR 1 30 490 - -
Aev08g0009 497 ProSitePatterns Zinc finger PHD-type signature. 262 306 IPR019786 -
Aev08g0009 497 SMART PHD_3 261 307 IPR001965 -
Aev08g0009 497 SUPERFAMILY FYVE/PHD zinc finger 259 313 IPR011011 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0009 262 307 C2H2 Transcription Factor Family AT3G01460 43.478 1.46e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev08g0009 PHD 9.4e-11 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0009 - - gmx:100813057 755.747