Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0004 ATGGGCAGCTCAAAGGAAAATCATCTGGCTCAGCTTCTGGTGATACCTTCCTCAGACTTTCAAGGCGGTTCAAGAACGGATGGTTTCAAGCTGGTGAAGGAGATGAAACACCATCGCCGGCAGCCTCTGAGCAACATCAATCAGAATATTGTGGACGAGGAGAAGCCCTCTGCTGTCCGGAAGTGTACACAGACAGCTCAGAACTACCCTGAAACCCTGTTAGCCCCGACAGCCAGTTACAAGTTAGATTGTTCAATCATAGATATCAATGAACACGAGGATGGCAGCGACAGTGACACTTCAGTTCCAGTGTTTGTGAAGCACACTGAAGCAATGTTAGATGAAATTGATAGAATTGAGGAAGTTGAAATGGAAGAGGCGGAGGAACCTGTTATGGACATTGATGCCTGTGATAGGAATGATCCACTTGCAGTTGTGGAGTACATAGATGATATCTACTGTTTTTATAAGAAAACAGAGAACTCAAGCCGCATCTCTCCAAGTTACATGACCAGTCAGTTCGACGTGAATGAGAAGATGAGGGCCATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACATTGTTCCTTACTGTCAATCTCATAGACAGGTTCTTGGAGCGTCAGACAGTGATCAGAAAGAAGCTTCAGTTGGTTGGTGTGACAGCCATGCTAATAGCTTGTAAATATGAGGAGGTTTTAGTCCCCACCGTCGACGATTTTGTTCTGATAACAGATAAGGCATACACAAGAACTCAAGTTCTAAATATGGAGAAACTAATGGTGAACACCTTGCAATTCAACTTGTCTGTACCTACTCCATACGTGTTCATGAGAAGATTTCTCAAGGCAGTTCATGCTGACAAAAAGCTGGAGGACTTGTCCTTCTTCTTGATCGAGCTATGCTTGGTGGAATGCAAAATGCTGAAGTTCTCACCGTCTTTGCTAGCTGCTGCAGCCATTTACACAGCTCAATGTAGTCTGCACCAGTTTAAGCAATGGACTAGGACAAGCGAGTGTTACACTGATTATTCGGAAGAGCAGCTTCTAGAATGCTCAAGATTGATGGTTACTTTACATCGGCAAGCTGGATCAGGGAAACTAACTGGAGTATATAGGAAGTTCAGTGCATGGAAGTATGGTTGTGCTGCTGCAAGAATAGAACCGGCCATATTTCTACTTGAAAATTATTAG 1215 0.4362 MGSSKENHLAQLLVIPSSDFQGGSRTDGFKLVKEMKHHRRQPLSNINQNIVDEEKPSAVRKCTQTAQNYPETLLAPTASYKLDCSIIDINEHEDGSDSDTSVPVFVKHTEAMLDEIDRIEEVEMEEAEEPVMDIDACDRNDPLAVVEYIDDIYCFYKKTENSSRISPSYMTSQFDVNEKMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQTVIRKKLQLVGVTAMLIACKYEEVLVPTVDDFVLITDKAYTRTQVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAVHADKKLEDLSFFLIELCLVECKMLKFSPSLLAAAAIYTAQCSLHQFKQWTRTSECYTDYSEEQLLECSRLMVTLHRQAGSGKLTGVYRKFSAWKYGCAAARIEPAIFLLENY* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0004 404 Pfam Cyclin, N-terminal domain 151 277 IPR006671 -
Aev08g0004 404 SMART cyclin_7 283 365 IPR013763 -
Aev08g0004 404 SMART cyclin_7 186 270 IPR013763 -
Aev08g0004 404 CDD CYCLIN 277 364 IPR013763 -
Aev08g0004 404 ProSitePatterns Cyclins signature. 181 212 IPR006671 -
Aev08g0004 404 PANTHER CYCLINS 66 395 IPR039361 -
Aev08g0004 404 CDD CYCLIN 180 269 IPR013763 -
Aev08g0004 404 Gene3D - 151 391 - -
Aev08g0004 404 SUPERFAMILY Cyclin-like 278 394 IPR036915 -
Aev08g0004 404 PANTHER CYCLIN-B2-3-RELATED 66 395 - -
Aev08g0004 404 SMART Cyclin_C_2 279 397 IPR004367 -
Aev08g0004 404 Gene3D - 165 277 - -
Aev08g0004 404 Pfam Cyclin, C-terminal domain 279 392 IPR004367 -
Aev08g0004 404 PIRSF Cyclin_A_B_D_E 21 403 IPR039361 -
Aev08g0004 404 SUPERFAMILY Cyclin-like 140 276 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0004 Aev-Chr8 37550 39888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0004 1 401 Core Cell Cycle Gene Families AT1G20610 54.023 1.07e-152 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0004 K21777 - gmx:100812029 552.747