Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2379 ATGACCGAAGAAGACCGAGCTTCCGCCGAGCTAACCACCGGCAATGGCTTCGCCGACACGGTCCAGACGGAGCTCGCAGGCGGCGATGCTGAGGTGACAGTGGTCGGAGATGGCGGTGACCGTGGTGGTGGCGGCGTGGCGGGAAGAGTGAAGGGACCGTGGTTGCCGGAGGAAGACGTGGTTTTGAGCCGATTGGTGGCGCAGTTCGGGGCGAGGAATTGGAGCACGATCGCGCGAGGAGTTCCAGGTCGGTCCGGTAAGTCGTGCCGGCTACGGTGGTGTAACCAGCTGGACCCTTGCGTCAAACGGAAGCCGTTCACTGAGGAAGAGGACAATATTATAGTGTCAGCTCATGCAATCCATGGAAACAAATGGGCAGCAATTGCAAGGCTTCTTCAAGGTAGAACAGATAATGCTATCAAGAACCACTGGAACTCTACTCTGAAGCGCAGGTGTATTGAACAGGGAAGATATGTCCCGGTACATGCTAATGCAATGGAAGATGGTAGCTTTGACAAAACAAAGGCATCCTCTGAAGAAACCATATCAATAGGGGATGTGAATTCATTCTATTCTACAGAAGCTAGAAATGTCATGGTGAATAATGAGGTTAAACAGTACGAAGATAAACCTCCAAGAAAAGATGGCGCCGAAGTGGAGGGAAATTGTACTATTCATCGACCAGTGGCACGTGTAAGTGCATTTAGTTTGTATAATCCTCCAAGCAGGCCAACAAATGGATCATGTTCAAAGATTCTCCCATCACAGAACCCTTCGGTCCAACTACCCAAAGCAGGTGAAGGAGCCTGCAACTTCTTTGATGGGATCAGATGTGAGCCCATGGTTCCATTGCAATGTGGTCATGGCTGCTGTGCAGCAGATTCAGGGGGAAGCCATTCTCATGGTTCAATATTAGGTCCGGAGTTTGTCGACTATATTGAGTCTCCTCCTTTCTCCAGTCATGAACTGATTTCCCTAACAACAGACTTAAACAATATGGCTTTTATCAAGAGTGGTCTTGAGAATCACGGTGCGAAAGTAACCGAGACTGCCGCATCACAAGGGGCTGCCACTGCTTCACAAACGGGCTTCTTAGGACAAGGTAGAAAGATTGACTACATGATGCAATATGAGGAAGGAACTGGCAAGTTTTTGGGTACAATCCAACAAGTGTTATCAACAAAGATGCCAATGCCTGCAGAAGTTTGA 1209 0.4905 MTEEDRASAELTTGNGFADTVQTELAGGDAEVTVVGDGGDRGGGGVAGRVKGPWLPEEDVVLSRLVAQFGARNWSTIARGVPGRSGKSCRLRWCNQLDPCVKRKPFTEEEDNIIVSAHAIHGNKWAAIARLLQGRTDNAIKNHWNSTLKRRCIEQGRYVPVHANAMEDGSFDKTKASSEETISIGDVNSFYSTEARNVMVNNEVKQYEDKPPRKDGAEVEGNCTIHRPVARVSAFSLYNPPSRPTNGSCSKILPSQNPSVQLPKAGEGACNFFDGIRCEPMVPLQCGHGCCAADSGGSHSHGSILGPEFVDYIESPPFSSHELISLTTDLNNMAFIKSGLENHGAKVTETAASQGAATASQTGFLGQGRKIDYMMQYEEGTGKFLGTIQQVLSTKMPMPAEV* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2379 402 CDD SANT 105 148 IPR001005 -
Aev07g2379 402 PANTHER MYB PROTEIN-RELATED 18 343 - -
Aev07g2379 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 152 IPR017930 -
Aev07g2379 402 ProSiteProfiles Myb-like domain profile. 51 97 IPR001005 -
Aev07g2379 402 PANTHER MYB TRANSCRIPTION FACTOR-LIKE PROTEIN 18 343 - -
Aev07g2379 402 Gene3D - 50 102 - -
Aev07g2379 402 CDD SANT 53 95 IPR001005 -
Aev07g2379 402 Gene3D - 104 168 - -
Aev07g2379 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 97 IPR017930 -
Aev07g2379 402 ProSiteProfiles Myb-like domain profile. 98 148 IPR001005 -
Aev07g2379 402 SUPERFAMILY Homeodomain-like 48 144 IPR009057 -
Aev07g2379 402 Pfam Myb-like DNA-binding domain 103 147 IPR001005 -
Aev07g2379 402 Pfam Myb-like DNA-binding domain 51 97 IPR001005 -
Aev07g2379 402 SMART sant 50 99 IPR001005 -
Aev07g2379 402 SMART sant 102 150 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2379 Aev-Chr7 24513858 24516350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2379 16 351 MYB Transcription Factor Family AT3G55730 45.143 2.07e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev07g2379 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2379 K09422 - gmx:100781228 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2379 07 24513858 24516350 Aev07g2379 07 24513858 24516350 ECH