Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2378 ATGTCAATGTTGGATAGTGAGGACAAGTCCCATGTTGTTGACATAGAAAACAGCAACAATGGCTGTAGTGTCGGCAGTGAAAGGCGTTCCTCTTCTTCTTCTTCTGGTGAGGAGGAAGAGGAGGCAAGTTGTTCCAACCATTGTGGTGCAGAGATTGTTGTTGGGGTGCCTGAGAAAAACAGAGGATCCTCTGCATCAGAGTGTTCTGTGGATCTGGAGGAGAATGCTGATGGTGATGTGAAGGTGCATTTGGATAAGGTTGAGAGGGATTGCAGGATTTGCCACCTCAGCATGGACATGACCAACCATGAATCTGGGACCCCTATTGAGTTGGGCTGTTCCTGCAAAGATGATTTGGCTGCTGCCCACAAGCACTGTGCTGAGGCTTGGTTCAAGATCAAAGGAAACAAAACATGTGAAATTTGCGGATCAATTGCACACAATGTACCTGGCTCAGTTGAAGTTCAGATGACAGAGCAGTGGAACGAGGCAAACGATGCTTCCGCGGTACCTGCAACAGTTCCTGCGCCCCCGGCAGAGACTCGAAGCTTCTGGCAGGGACACCGGTTCTTGAATTTCCTGCTAGCATGTATGGTGTTTGCCTTTGTGATATCCTGGCTTTTCCACTTCAATGTGCCCTCATGA 645 0.4884 MSMLDSEDKSHVVDIENSNNGCSVGSERRSSSSSSGEEEEEASCSNHCGAEIVVGVPEKNRGSSASECSVDLEENADGDVKVHLDKVERDCRICHLSMDMTNHESGTPIELGCSCKDDLAAAHKHCAEAWFKIKGNKTCEICGSIAHNVPGSVEVQMTEQWNEANDASAVPATVPAPPAETRSFWQGHRFLNFLLACMVFAFVISWLFHFNVPS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2378 214 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 10 214 - -
Aev07g2378 214 SUPERFAMILY RING/U-box 88 145 - -
Aev07g2378 214 SMART ringv_2 90 143 IPR011016 GO:0008270
Aev07g2378 214 MobiDBLite consensus disorder prediction 1 42 - -
Aev07g2378 214 ProSiteProfiles Zinc finger RING-CH-type profile. 83 149 IPR011016 GO:0008270
Aev07g2378 214 MobiDBLite consensus disorder prediction 15 31 - -
Aev07g2378 214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 76 149 IPR013083 -
Aev07g2378 214 PANTHER ZINC FINGER, RING-CH-TYPE 10 214 - -
Aev07g2378 214 CDD RING_CH-C4HC3_MARCH 91 143 - -
Aev07g2378 214 Pfam RING-variant domain 91 142 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2378 Aev-Chr7 24508346 24510481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2378 13 214 C3H Transcription Factor Family AT5G05830 58.824 1.88e-74 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2378 - - gmx:100818979 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2844 06 30123853 30127096 Aev07g2378 07 24508346 24510481 ECH
Aev02g1765 02 19454088 19457412 Aev07g2378 07 24508346 24510481 ECH
Aev07g2378 07 24508346 24510481 Aev07g2378 07 24508346 24510481 ECH