Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2369 ATGGCTCCTCCTTCTGATATCAATCACCTTTCTCATCCATGTATATATGGGGATTATTCTTCTTCACGCTCAGAGAGAAGGCCTGGTTTCATGAGATGGTTAAGTAAGCTTTTCAAAGGAGGGTCTAATAGAGGAAGGGGAGGCGGCCGCCGTCTCCAAGAGGCCGGAGAGGAGAATATGGTGTGGCGCGCTCCATCTAGAGCTTTGGATGACCGTACTAGAGCTCAGAAGGAGAAAGATGATCTAGGCCATAAAATGGCACATTCTTCAGAAGAAGATTTTAAGAGACCAAATGGCCATAATCAAGGATATAATTGGGGGACAGACACTGATGATTACCCAAAAGCACTTCAGGATAGTCTGAACTCATCAGCATACCCACCATATTCTGCTGCACCATACTATCCCCCAAGGGATTATAGAAAAATATGTGGTGGCTGCAACCAAGACATACTCTATGGAAATTGTTTGAGCTGCATGGATACTTATTTTCATCCAGATTGCTTTCGGTGTTACTCTTGTCATTACCCCATTACTGAGCGCGAGTTTTCTTTGTCAGGGAAGCATCCATATCATAAGTCCTGTTTTAAAGAATTGACACACCCAAAATGTGAAGTTTGCTTCCAATTTATTCCTATAAATGATGCTGGTTTAATAGAGTATAGGTGCCACCCGTTTTGGACCCAAAAGTATTGTCCATCTCATGAATATGATAACACAGCTCGCTGCTGTAGTTGTGAAAGATTGGAGCCTCGGAATATAAAATACTATAGATTGGAAGATGGGCGAAGTTTGTGCATGGAGTGCATGGAATCTGCTATAATAGACACTGGTGATTGTCAGCCTCTTTATCATTCCATCAGAGATTACTATGAAGGAATGAACATGAGAATTGATCAGCAAATTCCCATGCTTCTTGTGGCCAGAGAAGCACTTAATGAAGCTATTGTGGGCGAGAAAAATGCTGTTCATCACATGCCAGAAACTAGGGGAATTTGCCTTTCAGAAGAGCAAACTATCACAAGTATCCATAGAAGGCCAAGAAATGGAAGCCATCGACGAATAGGGATGAGGACTCAGAATCAGATGCTGGTTAGAAAGTGTGAAGTTACAGCAATTCTTGTTCTTTATGGTCTTCCGAGATTACTCACAGGAGCAATCCTTGCCCATGAGTTAATGCATGCGTGGTTACGACTTAAAGGTTACCGCAACCTTAATCCTGAAGTAGAGGAAGGTATATGTCAAGTTCTTTCATATATGTGGCTTGAGTCAGAGGTAATGCCATCAACCTCTGCAGCATCATCATCTACTTCTTCCTCCTATTCTTCTTCCTACTCCTACCCTTCATCTTCCAAGAAGGGAGCAAAATCTCACGTTGAGAATAAATTGGGAGAGTTTTTCAAGAACCAGATTGCCAATGATTCTTCACCTGCTTATGGTGGTGGATTCAGAGCTGCTAATGAAGCTGTTAACAAATATGGTTTACGTGCAATTCTTGACCATATTCGTTTCACTGGTATGCTTCCAGAATAA 1533 0.4201 MAPPSDINHLSHPCIYGDYSSSRSERRPGFMRWLSKLFKGGSNRGRGGGRRLQEAGEENMVWRAPSRALDDRTRAQKEKDDLGHKMAHSSEEDFKRPNGHNQGYNWGTDTDDYPKALQDSLNSSAYPPYSAAPYYPPRDYRKICGGCNQDILYGNCLSCMDTYFHPDCFRCYSCHYPITEREFSLSGKHPYHKSCFKELTHPKCEVCFQFIPINDAGLIEYRCHPFWTQKYCPSHEYDNTARCCSCERLEPRNIKYYRLEDGRSLCMECMESAIIDTGDCQPLYHSIRDYYEGMNMRIDQQIPMLLVAREALNEAIVGEKNAVHHMPETRGICLSEEQTITSIHRRPRNGSHRRIGMRTQNQMLVRKCEVTAILVLYGLPRLLTGAILAHELMHAWLRLKGYRNLNPEVEEGICQVLSYMWLESEVMPSTSAASSSTSSSYSSSYSYPSSSKKGAKSHVENKLGEFFKNQIANDSSPAYGGGFRAANEAVNKYGLRAILDHIRFTGMLPE* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2369 510 Pfam Protein DA1 293 504 IPR022087 -
Aev07g2369 510 Pfam LIM domain 144 197 IPR001781 -
Aev07g2369 510 ProSitePatterns LIM zinc-binding domain signature. 144 178 IPR001781 -
Aev07g2369 510 Gene3D Cysteine Rich Protein 139 201 - -
Aev07g2369 510 ProSiteProfiles LIM domain profile. 142 202 IPR001781 -
Aev07g2369 510 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 20 509 - -
Aev07g2369 510 MobiDBLite consensus disorder prediction 38 109 - -
Aev07g2369 510 SMART lim_4 143 195 IPR001781 -
Aev07g2369 510 CDD LIM_DA1 144 196 - -
Aev07g2369 510 MobiDBLite consensus disorder prediction 64 98 - -
Aev07g2369 510 PANTHER PROTEIN DA1-RELATED 2 20 509 IPR045218 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2369 Aev-Chr7 24457585 24463807 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev07g2369 DA1-like 3.2e-98 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2369 - - aip:107608934 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2369 07 24457585 24463807 Aev07g2369 07 24457585 24463807 ECH
Aev03g0799 03 6327267 6333008 Aev07g2369 07 24457585 24463807 PCT