Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2350 ATGACAGGGTTGGGATGTTCATGTGGAGCATGCAAGTTCCTAAGGAGAAAGTGCACGAGTGGTTGTGTATTTGCTCCTTACTTCTCATATGAACAGGGCTCAGCACATTTTGCAGCAGTTCATAAGGTTTATGGAGCCAGCAATGTGTCAAGGCTTTTGTCTCATCTTCCAATTCACAATCGGAGTGATGCTGCCATTACCATCACTTATGAAGCTCTCGCTCGCATGCACGATCCTGTTTATGGCTGTGTTGCTCATATCTATGCATTGCAGCAACAGGTTGCTAGCTTGCAAGAGGAGATAGATATAATTGGGAGCCTAATGGCAAATTCCACAGTTGGTACAGCTGTCAATTGTGGCGGTTTCCAAGCATCAATTATGGACTCAAACAATGGAATACAGAACACTACTTTTCAGGATGATGCTGCTATTAGGACTCAATTCTATCAAAATCAATTGGCTAATCTTCTTTCTCATCATCATCAAGGAAATGACATGATGATGAACCAAACTTTGGACTCATCAAAATTGGATATAGAGGTTCCTAATAATAATAATAATAATAATGCACTAAATGGAGTACTTGAAGAGCCTCTTTTATTTGATGATGATGATGATGATTCAAACTCCAATAATCCACTAGACAAGTTCCTATCTGGAATTGACCAAGAAGGATTCTTAAATCACCCTTGGTTCAAGCATAATGCACGCATAATAAATTAA 723 0.3928 MTGLGCSCGACKFLRRKCTSGCVFAPYFSYEQGSAHFAAVHKVYGASNVSRLLSHLPIHNRSDAAITITYEALARMHDPVYGCVAHIYALQQQVASLQEEIDIIGSLMANSTVGTAVNCGGFQASIMDSNNGIQNTTFQDDAAIRTQFYQNQLANLLSHHHQGNDMMMNQTLDSSKLDIEVPNNNNNNNALNGVLEEPLLFDDDDDDSNSNNPLDKFLSGIDQEGFLNHPWFKHNARIIN* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2350 240 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Aev07g2350 240 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Aev07g2350 240 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 235 - -
Aev07g2350 240 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2350 Aev-Chr7 24286131 24287818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2350 1 110 AS2 family AT5G06080 72.727 7.52e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev07g2350 LOB 1.5e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2350 K13945 - gmx:100787638 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2350 07 24286131 24287818 Aev07g2350 07 24286131 24287818 ECH