Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2343 ATGAGTTTTGTTTTTCGAGGAACACGAGCAGACATAGAAAATGGATTTCCTGGATTTATGCCTGAGAGGCGTGCATTGCGTGTTCATCCAGCTCGGCCTAGTAATTCCAATTCACTCACTTTCCTCGTCACAGTTCTTCTGTTATTCATGATACTGAACTCACACCAGATGTCACCAAATTTTCTGCTCTGGCTGGTTCTTGGTGTTTTCTTAATGGCTACTATGTTGAGGATGTATGCAACATGTCAACAGCTACAAGCTCAGGCACAAGCTCATGCAGCAGCGGCTAGTGGGCTTCTTGGCCATACTGAACTGCGGCTGCATATGCCACCATCAATAGCACTTGCTACCCGGGGCCGTTTGCAAGGCCTCAGACTTCAACTTGCACTTCTTGATCGGGAATTTGACGATCTAGATTATGAAACATTAAGAGCTCTTGATTCAGATAATGTTCCTACAGCATCTTCTATGACTGATGAAGAGATAAATGCTCTTCCTGTACACAAATACAAGGTTTCTGGCCCGCAAAATGGCTCCTCAATGCAACAAGCTTCTTCTTCCACTCCAACTGAGAAGAAGCAAGATAATTCAAATGCAGCTGGGAGCATGAAAGCTTCGGACGATGAGCTGACATGTAGTGTATGTTTGGAACAAGTTAATGTCGGAGATGTACTCCGTAGCTTGCCCTGCTTGCATCAGTTTCATGCAAATTGCATCGACCCATGGCTGCGGCAACAAGGAACATGCCCTGTGTGTAAATTCAGAGCAGGATCTGGGTGGAATGAAAGTGCTCACCATAATGACATTGCAGACATGGTTTGA 822 0.4513 MSFVFRGTRADIENGFPGFMPERRALRVHPARPSNSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAQAQAHAAAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTASSMTDEEINALPVHKYKVSGPQNGSSMQQASSSTPTEKKQDNSNAAGSMKASDDELTCSVCLEQVNVGDVLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSGWNESAHHNDIADMV* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2343 273 MobiDBLite consensus disorder prediction 170 203 - -
Aev07g2343 273 MobiDBLite consensus disorder prediction 173 203 - -
Aev07g2343 273 Pfam Ring finger domain 211 253 IPR001841 -
Aev07g2343 273 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 257 IPR013083 -
Aev07g2343 273 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SDIR1 1 267 - -
Aev07g2343 273 SMART ring_2 212 252 IPR001841 -
Aev07g2343 273 SUPERFAMILY RING/U-box 207 256 - -
Aev07g2343 273 PANTHER TARGET OF ERK KINASE MPK-1 1 267 - -
Aev07g2343 273 CDD RING-H2_PA-TM-RING 211 253 - -
Aev07g2343 273 ProSiteProfiles Zinc finger RING-type profile. 212 253 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2343 Aev-Chr7 24215115 24217333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2343 1 273 C3H Transcription Factor Family AT3G55530 77.899 2.47e-146 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2343 K16283 - gmx:100777936 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2343 07 24215115 24217333 Aev07g2343 07 24215115 24217333 ECH