Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2334 ATGGCTTTCAGAATCATCAGCATTGTAACCCTCTTAGCTCTCCTCACAGCAACAGAAGCTAGAATCCCCGGCGTCTACGCCGGCGGCGAGTGGCAGAGCGCTCACGCCACATTCTACGGTGGCAGCGACGCCTCAGGAACAATGGGAGGGGCATGTGGATATGGAAACTTGTACAGCCAAGGCTATGGCGTGAACACGGCAGCATTGAGCACTGCTCTGTTCAACAGTGGATTAAGCTGTGGAGCATGTTTTGAGATAAAGTGCGCCAATGATCCTAATTGGTGCCATGCAGGCTCACCTTCCATTTTCATCACTGCAACCAACTTTTGCCCTCCGAACTATGCTCTTCCTAGCGACAATGGAGGATGGTGCAACCCTCCAAGGCCTCACTTCGATCTCGCCATGCCTATGTTCCTCAAGATCGCTGAGTACCGCGCTGGAATCGTCCCTGTCTCATTCCGCAGGGTTCCATGCCGAAAGCAGGGAGGAATAAGGTTCACAATAAACGGGTTCCGTTACTTCAACCTGGTTCTGATCAGCAACGTCGCGGGTGCAGGGGATATAGTGAGCGTGAGCGTCAAAGGGTCTAGGACTGGCTGGATGACCATGACCCGCAACTGGGGTCAGAATTGGCAATCAAACTCTGTTCTCATTGGTCAGTCACTCTCCTTCAGGGTCACAGCTAGTGACCGACGCACTTCCACCTCTTTCAACATTGTCCCTTCCACTTGGCAATTTGGCCAAACCTTCACCGGCAAAAATTTCAGGGTCTAG 774 0.5245 MAFRIISIVTLLALLTATEARIPGVYAGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCANDPNWCHAGSPSIFITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKQGGIRFTINGFRYFNLVLISNVAGAGDIVSVSVKGSRTGWMTMTRNWGQNWQSNSVLIGQSLSFRVTASDRRTSTSFNIVPSTWQFGQTFTGKNFRV* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2334 257 Pfam Lytic transglycolase 66 153 IPR009009 -
Aev07g2334 257 PRINTS Expansin/Lol pI family signature 30 45 IPR007118 GO:0005576
Aev07g2334 257 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Aev07g2334 257 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Aev07g2334 257 PRINTS Expansin/Lol pI family signature 70 88 IPR007118 GO:0005576
Aev07g2334 257 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Aev07g2334 257 PRINTS Expansin/Lol pI family signature 48 66 IPR007118 GO:0005576
Aev07g2334 257 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 49 163 IPR007112 -
Aev07g2334 257 SMART dpbb_1 66 153 IPR007112 -
Aev07g2334 257 Pfam Expansin C-terminal domain 164 241 IPR007117 -
Aev07g2334 257 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Aev07g2334 257 PRINTS Expansin signature 88 99 IPR002963 GO:0009664
Aev07g2334 257 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Aev07g2334 257 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Aev07g2334 257 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Aev07g2334 257 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Aev07g2334 257 PRINTS Expansin signature 61 75 IPR002963 GO:0009664
Aev07g2334 257 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Aev07g2334 257 PRINTS Expansin signature 209 230 IPR002963 GO:0009664
Aev07g2334 257 PANTHER EXPANSIN-A15 4 256 IPR002963 GO:0009664
Aev07g2334 257 SUPERFAMILY Barwin-like endoglucanases 30 181 IPR036908 -
Aev07g2334 257 Gene3D - 17 159 IPR036908 -
Aev07g2334 257 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 252 IPR007117 -
Aev07g2334 257 SUPERFAMILY PHL pollen allergen 160 252 IPR036749 -
Aev07g2334 257 Gene3D - 163 255 IPR036749 -
Aev07g2334 257 PANTHER EXPANSIN-A6 4 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2334 Aev-Chr7 24106554 24109776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2334 1 257 Expansin Gene Family AT2G39700 81.323 9.87e-164 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2334 - - jre:108986296 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2799 06 29545473 29550858 Aev07g2334 07 24106554 24109776 ECH
Aev02g1674 02 18434936 18437865 Aev07g2334 07 24106554 24109776 ECH
Aev10g1808 10 19915455 19917429 Aev07g2334 07 24106554 24109776 ECH
Aev04g3144 04 31030151 31033436 Aev07g2334 07 24106554 24109776 ECH
Aev07g2334 07 24106554 24109776 Aev07g2334 07 24106554 24109776 ECH