Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2327 ATGCGGAGGAACAGCCCAGGATACTACAGTCCTCCGAGGAGAGGGTACGGCGGCAGAGGGAGGTCACCTCCGCCACCACCACCTCCGGCGAGGAGGGGATACGGTGGTGGTGGTGGTGGTGGCAGGCGCAGGGAGAACAGCAATGGAAGCTTGCTTGTTCGGAACATTCCGCTTGATTGCAGAGCCGAGGAGCTCCGGGTCCCGTTCGAGCGGTTCGGACCCGTTCGTGATGTCTACATCCCAAAGGACTATTACTCAGGAGAACCTCGAGGCTTTGCATTTGTGCAGTTTGTGGATGCTTATGATGCCTCTGAGGCACAGTACCATATGAACAGACAGATTTTTGCTGGAAGGGAAATATCTGTTGTCGTAGCTGCAGAAACAAGAAAAAGGCCGGAGGAGATGCGCCAAAGGACTAGGGTCAGAGGACCAGCAAGCTATGGGGGCCGAAGATCTCATTATGGTCGATCTCGATCTCGCTCAGTTAGCAGATCACGCTCTCCTCCCCCTTATCACTCAGGTTCTAGAAGTAGATATCGCTCAAGGTCCTACTCTCCTGCCCAAAGACGGCGAAGTGATTACTCTGTGTCCCCTAGAAGGCAAGCAGAGCACCCCAGATCACCAAGAGGTCTTTCTGCGGAGCGAGATGGTGATCAGAAGCGCCGGTCATATTCTCCAGCTTATGGCAATGGTTCTGATCAGAATCAAAGCAATGGTTATGATGAGAAACCTATGTACAAGTCTGAGGCTGATAGGGGCGAGTGGAAGAAGTCATCTGGGCGTAGAGCTTCGAGATCACCCCTTGGATCTAGATCTAGATCAAGGTCTGTCGATATGTCTCCCGGACATGGACAATGA 858 0.5303 MRRNSPGYYSPPRRGYGGRGRSPPPPPPPARRGYGGGGGGGRRRENSNGSLLVRNIPLDCRAEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDAYDASEAQYHMNRQIFAGREISVVVAAETRKRPEEMRQRTRVRGPASYGGRRSHYGRSRSRSVSRSRSPPPYHSGSRSRYRSRSYSPAQRRRSDYSVSPRRQAEHPRSPRGLSAERDGDQKRRSYSPAYGNGSDQNQSNGYDEKPMYKSEADRGEWKKSSGRRASRSPLGSRSRSRSVDMSPGHGQ* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2327 285 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 51 120 IPR000504 GO:0003723
Aev07g2327 285 Gene3D - 21 144 IPR012677 -
Aev07g2327 285 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 49 127 IPR000504 GO:0003723
Aev07g2327 285 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 24 282 - -
Aev07g2327 285 MobiDBLite consensus disorder prediction 244 261 - -
Aev07g2327 285 PANTHER OS02G0252100 PROTEIN 24 282 - -
Aev07g2327 285 MobiDBLite consensus disorder prediction 1 50 - -
Aev07g2327 285 SUPERFAMILY RNA-binding domain, RBD 45 156 IPR035979 GO:0003676
Aev07g2327 285 MobiDBLite consensus disorder prediction 263 279 - -
Aev07g2327 285 MobiDBLite consensus disorder prediction 225 242 - -
Aev07g2327 285 MobiDBLite consensus disorder prediction 129 285 - -
Aev07g2327 285 MobiDBLite consensus disorder prediction 193 222 - -
Aev07g2327 285 MobiDBLite consensus disorder prediction 18 32 - -
Aev07g2327 285 SMART rrm1_1 50 123 IPR000504 GO:0003723
Aev07g2327 285 MobiDBLite consensus disorder prediction 161 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2327 Aev-Chr7 24060191 24063211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2327 27 111 Eukaryotic Initiation Factors Gene Family AT3G11400 38.372 8.24e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2327 K12900 - gmx:100804294 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2327 07 24060191 24063211 Aev07g2327 07 24060191 24063211 ECH