Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2307 ATGGCTTCTTCCTTGGATATGTCGCTTGATGATAGGATAAAGACCAGGAGTAACAGAGGCAGAGGACGTGGCAGAGCTCGTCCTGGCCGTGGGCTAGGCAGGAATGTTGGTGGTGGAAGATCGACTGGTGCTGTTCGCAGAGGTCCTCTTACATCGATTCGCAGGGCCAGGCCTTTTCCATGGCAGCATGATTTGTTCGAAGACAGCCTAAGAGCTGCAGGGATACAAGGAGTAGAAGTTGGCACTAAGTTGTATGTTTCAAACTTGGACCATGGAGTAACTAATGAAGATATAAGGGAACTTTTTTCTGAGATTGGAGACTTGAAACGCTTTGCAGTTCATTATGACAAAAATGGACATCCAACTGGTTCAGCTGAAGTTGTCTATGCTAGAAGAAGTGATGCATTTGCTGCTCTTAAACGATACAATAATGTACTTCTGGATGGGAAGCCCATGAAGATTGAGATTGTTGGTGCCAACGCAGAATTGCCGATAAATGCTCGCGTAAATGTCTCCTCCTCCGGGGTAACTGGGCAGAGGAAGAGGACAGTTGTAATGATGCCTGGTGGAGGTCGAACTGGAGGTCCGGCTGGTCTCAATCGCGCTGCTATTGGAGCACAGCGTGGTGGTTCGAGGATGAGGGGTGGGATTGGACGTGGTCGAGGAGGCCGTGGTCGAGGAGGCCGTGGTCGCGGCCGTGGAGGTGGAGGTGGAGGTGGACGCGGGAGAGGTGGAGGTAGAGGTAGTGGGAAAAAGGATAAGTCAGCTGAGGAACTTGATAAGGAATTGGAGACCTATCATGCTGAGGCTATGAACATCTCATGA 825 0.5042 MASSLDMSLDDRIKTRSNRGRGRGRARPGRGLGRNVGGGRSTGAVRRGPLTSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYVSNLDHGVTNEDIRELFSEIGDLKRFAVHYDKNGHPTGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEIVGANAELPINARVNVSSSGVTGQRKRTVVMMPGGGRTGGPAGLNRAAIGAQRGGSRMRGGIGRGRGGRGRGGRGRGRGGGGGGGRGRGGGRGSGKKDKSAEELDKELETYHAEAMNIS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2307 274 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 1 273 - -
Aev07g2307 274 SUPERFAMILY RNA-binding domain, RBD 24 156 IPR035979 GO:0003676
Aev07g2307 274 SMART rrm1_1 83 155 IPR000504 GO:0003723
Aev07g2307 274 MobiDBLite consensus disorder prediction 246 267 - -
Aev07g2307 274 CDD RRM_THOC4 82 156 - -
Aev07g2307 274 MobiDBLite consensus disorder prediction 1 46 - -
Aev07g2307 274 MobiDBLite consensus disorder prediction 205 274 - -
Aev07g2307 274 Pfam C-terminal duplication domain of Friend of PRMT1 209 268 IPR025715 -
Aev07g2307 274 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 84 152 IPR000504 GO:0003723
Aev07g2307 274 SMART FoP_duplication_2 194 274 IPR025715 -
Aev07g2307 274 Gene3D - 77 158 IPR012677 -
Aev07g2307 274 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 82 159 IPR000504 GO:0003723
Aev07g2307 274 PANTHER THO COMPLEX SUBUNIT 4C 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2307 Aev-Chr7 23930287 23933002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2307 81 156 Eukaryotic Initiation Factors Gene Family AT2G23350 38.158 4.09e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2307 K12881 - gmx:100801491 313.538