Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2305 ATGGCTACTGAAGAGGTGAATAAGCCTCAATCACTTCCTCCATACCCTGAGATGATTATGAGGGCACTGGATTCACTGAATGACCCAAATGGATCCAACAAATCAGCAATAGCAAAGTACATAGAATCAACCTATGGTGAGTTACCAGAAGGAAACACAACACTTTTGGCTCATCACCTCAACAAGATGAAGGACAGTGGTGAGCTTGTGTTCTGGAAGAACAACTACATGAAGCCTGACCCTAATGCCCCACCAAGGAGGGGCCGAGGGAGGCCGCCGAAGCCGAAGGCTCCCCTGCCTCCGGGGACTGTCCTGTCCCCTCCAAGGCCAAGGGGTCGCCCTCCAAAGGACCCCAATGCACCACCAAAGCCACCAAAGGCTAAGTCCACACCCGGAACTGGTAGGCCTAGAGGCAGGCCTAAGAAGATTGCCCGGTCCTCCCCACCGCCTCCGGCCGCACCCCCAAGTGCTGCGGCCGCCACCGGTGGAAGGCCTAGAGGTAGGCCTCCTAAGGTGAAGCCTCAATTCACAGAAGTGAGTGTTGAGTCATAG 552 0.5507 MATEEVNKPQSLPPYPEMIMRALDSLNDPNGSNKSAIAKYIESTYGELPEGNTTLLAHHLNKMKDSGELVFWKNNYMKPDPNAPPRRGRGRPPKPKAPLPPGTVLSPPRPRGRPPKDPNAPPKPPKAKSTPGTGRPRGRPKKIARSSPPPPAAPPSAAAATGGRPRGRPPKVKPQFTEVSVES* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2305 183 Gene3D - 7 85 IPR036388 -
Aev07g2305 183 MobiDBLite consensus disorder prediction 94 129 - -
Aev07g2305 183 MobiDBLite consensus disorder prediction 74 183 - -
Aev07g2305 183 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 11 80 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev07g2305 183 PANTHER HMG-Y-RELATED PROTEIN A 1 179 IPR031059 GO:0003677|GO:0005634
Aev07g2305 183 PANTHER HISTONE H1 1 179 - -
Aev07g2305 183 PRINTS AT-hook-like domain signature 106 117 IPR017956 GO:0003677
Aev07g2305 183 PRINTS AT-hook-like domain signature 86 96 IPR017956 GO:0003677
Aev07g2305 183 PRINTS AT-hook-like domain signature 132 142 IPR017956 GO:0003677
Aev07g2305 183 SMART h15plus2 9 75 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev07g2305 183 Pfam linker histone H1 and H5 family 13 73 IPR005818 GO:0000786|GO:0003677|GO:0006334
Aev07g2305 183 PRINTS High mobility group protein (HMGY) signature 84 96 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Aev07g2305 183 PRINTS High mobility group protein (HMGY) signature 110 121 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Aev07g2305 183 PRINTS High mobility group protein (HMGY) signature 123 142 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Aev07g2305 183 PRINTS High mobility group protein (HMGY) signature 99 110 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Aev07g2305 183 SUPERFAMILY "Winged helix" DNA-binding domain 8 87 IPR036390 -
Aev07g2305 183 SMART AT_hook_2 134 146 IPR017956 GO:0003677
Aev07g2305 183 SMART AT_hook_2 108 120 IPR017956 GO:0003677
Aev07g2305 183 SMART AT_hook_2 163 175 IPR017956 GO:0003677
Aev07g2305 183 SMART AT_hook_2 86 98 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2305 Aev-Chr7 23918907 23919891 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2305 - - gmx:100793697 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2305 07 23918907 23919891 Aev03g0729 03 5608244 5609212 PCT