LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev07g2293	ATGCATTCACAAGACAGGGATGCTAGGACACCAAAGAGTGGATTGGAAGGAGGTGGAACTTTGAATTCCAATAAGATGAATCGTAGTGGGAATCTAAGCAGCAAAGATATGATTCTTAGAGCTGATAAGATTGATCTGAAGAGTTTGGATGCTGAGCTAGAGAAGCACTTGACCAGGGTATTTTCCATGAGCATTGAGAAAAAAAGGCCTAAAGAGGAGTGGGAGATTGATTTGGCCAAATTGGATTTGCGATATGTTGTAGCTAATGGGGTCTATGGTACCGTCTACAGGGGCACCTATGACGGCCAAGATGTTGCAGTGAAAGTGTTGGATTGGGGTGAGGATGGTGCAGCATCTGCCGCTTCCTTGCGAGCTTCATTTCGGCAGGAAGTTACTGTCTGGCACAAACTTGATCATCCAAATGTCACAAAATTTATTGGAGCTTCAATGGGGACCTCAAATCTCAAGATTCCTGACCAAGGCACTAGTCAAGAATCCCTTCCTTCCCGAGCATGTTGCGTCATTGTTGAGTTTGTCCACAGTGGAACACTAAAACAATACTTGTTTAAAATCAGACAAAAGAAACTTCCGTATAAGGTTGTTGTTCAGCTGGCTTTGGATCTTTCTAGAGGTCTTAGTTACCTACACTCGAAAAAGATCGTGCATCGCGATGTTAAAGCAGAGAATATGTTGCTTGATACTGATTGTAATTTGAAGATAGCTGATTTTGGAGTTGCCCGTGTTGAAGCATTGAATCCATGTGAGATGACGGGTGAAACTAGAACCATTGGATATATGGCACCTGAGGTTCTACATGACAAGCCTTACAACAGAAGATGTGATGTCTACAGCTTTGGCATTTGCTTGTGGGAAATTTATTGTTGTGACATGCCTCATCCAAATCGAAGCTTTGCTGATGTCTCATTTGCCGTCGCTAATCAGAACCTGCGACCGGATATTCCTAGATGCTGCCCAAGTGGCTTAGCGAGCATCATGCGAAAATGCTGGGACAGGAACCCGGACAAGCGGCCGGAGATGGAGGAGGTGGTGAGAATGCTTGAAGCACTTGATACCAGCAAAGGAGGTGGAATGATACCTGATGATCAGACCCCATTTTGTTTCTGTTTTGGATCTGCCCGTGGTCCTTACCTTTCAATCATATTTCAAAGGGAAATCCTTTTTCCTTTGTTATTGTTTTCAATTTTCTAG	1209	0.4367	MHSQDRDARTPKSGLEGGGTLNSNKMNRSGNLSSKDMILRADKIDLKSLDAELEKHLTRVFSMSIEKKRPKEEWEIDLAKLDLRYVVANGVYGTVYRGTYDGQDVAVKVLDWGEDGAASAASLRASFRQEVTVWHKLDHPNVTKFIGASMGTSNLKIPDQGTSQESLPSRACCVIVEFVHSGTLKQYLFKIRQKKLPYKVVVQLALDLSRGLSYLHSKKIVHRDVKAENMLLDTDCNLKIADFGVARVEALNPCEMTGETRTIGYMAPEVLHDKPYNRRCDVYSFGICLWEIYCCDMPHPNRSFADVSFAVANQNLRPDIPRCCPSGLASIMRKCWDRNPDKRPEMEEVVRMLEALDTSKGGGMIPDDQTPFCFCFGSARGPYLSIIFQREILFPLLLFSIF*	403

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev07g2293	402	ProSiteProfiles	Protein kinase domain profile.	81	356	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev07g2293	402	Gene3D	Phosphorylase Kinase; domain 1	70	159	-	-
	Aev07g2293	402	SUPERFAMILY	Protein kinase-like (PK-like)	62	353	IPR011009	-
	Aev07g2293	402	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	220	232	IPR008271	GO:0004672\|GO:0006468
	Aev07g2293	402	PRINTS	Tyrosine kinase catalytic domain signature	176	189	IPR001245	GO:0004672\|GO:0006468
	Aev07g2293	402	PRINTS	Tyrosine kinase catalytic domain signature	280	302	IPR001245	GO:0004672\|GO:0006468
	Aev07g2293	402	PRINTS	Tyrosine kinase catalytic domain signature	324	346	IPR001245	GO:0004672\|GO:0006468
	Aev07g2293	402	PRINTS	Tyrosine kinase catalytic domain signature	214	232	IPR001245	GO:0004672\|GO:0006468
	Aev07g2293	402	CDD	STKc_MAP3K-like	90	353	-	-
	Aev07g2293	402	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	18	375	-	-
	Aev07g2293	402	Gene3D	Transferase(Phosphotransferase) domain 1	181	363	-	-
	Aev07g2293	402	Pfam	Protein tyrosine and serine/threonine kinase	84	353	IPR001245	GO:0004672\|GO:0006468
	Aev07g2293	402	SMART	serkin_6	81	356	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev07g2293	402	PANTHER	KINASE ATMRK1, PUTATIVE-RELATED	18	375	-	-
	Aev07g2293	402	MobiDBLite	consensus disorder prediction	1	29	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev07g2293	Aev-Chr7	23815573	23816781	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev07g2293	1	382	MAP Kinase Kinase Kinase	AT3G22750	70.984	0.0	575

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Aev07g2293		PK_Tyr_Ser-Thr	2.1e-57	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev07g2293	-		-	gmx:100803917	620.157