Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2273 ATGTCTTTCTCTCTAATCGAAGCGTGCAAGAAGAGAAGACGATGGCCAAAGATCTTCAGGTTTCACTCTTTTGCTGATCCTGGATGCCCAATTGCCCCTTCGGGTCCTTTTCGTGATAATGTTCGAACATTTCTTCAAGAATGTGCTGAGTTAGAAGACTACGTTGTGCAGAACCACCCTCTATGGTGTACCCTTTTGGTCAGCGACAAGACCAATCTCATGGCACCACTCTACACCCTCGAAGAGAATGTTTACAACTCTTCTCACCCCTTCTGTGATCATTGCCGCTGTGCAGGTTGGAGTGGGCATTTTGTGTCGAAGAGAAGGTACCATTTCATAATCCCTATGGACAATGGATGGCATAAACCTTTAACTGAAGGGGCTCTTGATAATCAGAGCCACCTCTTGCATGGGGTGATTCATTGCAATGGGTATGGCCATTTGGTTTGCATTAATGGCATTGAAGGAGGCTCCAATGTTCTCAGTGGGAGGGAGATCATGGATCTATGGGACAGGATCTGCACAAACCTTCGAGCTAGGAAAATTGCAGTAGAAGATGTTTCAAGGAAGAGGTGTATGGATCTTCGGCTACTTCATGGAGTTGCTTATGGCCACTCTTGGTTTGGTAGGTGGGGCTATAAATTTTGCCGTGGAAGTTTTGGGGTGACAGTTCAGAACTATTATGAAGCAATTGAAGCTCTAGGTTCCTTGGATCTTGATGAGATAGTAAGAGATTTGACTTTGAGCAAGATAAAGTGTCACAAAGAGATCAAACAAATAGTTCGATGCTATAGAGACATGAGTGAGACTCAAATCACCACAATGAGGGATCTTCTGAGGTTCATGCTAACCGTCAAGTCTCGAGCCCCTTCGTCTAAGACGTCGGTTAACTGTGCTGCTCCTCCTTCAGCCTTCATCTCAAGAAATTCATCCAAACATGCCCTTTCGCACAGATCGAATCCGTTGAAGGACAAGTCGGCGAGGTATAAGAAGTTCAGCACAGCAGTGGCTAACATGGATAGCAGGTGGCCAACGAGGAGGCTGGAGTTTGCAGCTCAGGTGATCGTCGATGCACTGAAAGAGCACAAGGCTGTGAAGTCAGGTTCTGGTGGGATGACAAGGCAGGATGTGAGGGATGCTGCTAGGCTCCACATTGGTGACACAGGCTTGCTTGACTATGTGCTGAAATCACTGAACAACTTGATCGTTGGGAACTATGTCGTTCGCAGAATGGTTAACCCGTCAACTAGGATCCTTGAGTATACAATTCATGAGCTTGGAAATGGGTTCAAGTCCCCAGAAGCTGTGATGGAGCCTGAGGTAATGACTCTTGTAGATCCTCAAGGAGAGTCATCAAGGGTTCCAGGTAATGATGTTTACAGTGATGTGTTTTACCTTTACAAGAATGTGCTATTGGGGTACCCGAATTCGGAATCAGTGGATTTAGCAGTTCAGATAGTAGTAGATAGCAGGCATTTTGTGAAGGAATGGGAATACATGGATGAAATGGAACAAGTTTTAACCTTCATTTGCAGGCTAAAGCCGAATTTTGTTGACATAAAATCTGAGCTGAGTAGGGAACCACCTTGTGGTGAGATTGTGATGGTTCCACTTCATTCAACTGTTGGGGACTTAAAGCATGCTGCTGAGGCTGCACTGAGAGACACGTACTGCATCGCCGAGAGGCTCATAGTGACGGACATAACGGAATTGATGAATGCAGGTGATGAGGAGGTTCTGTTTGGTGTGATTCAATCTGGTGTTGAGCTTTGTGTTAGGGGGATTGCATTGGATCTGTGCACACCATTGAAGTATCAGGGTGGTTCTGATAACTGGAAGGTGAGGTGTGAGTGTGGTGCACAGGATGATGATGGTGAGAGGATGGTGGCTTGTGACATATGTGAGGTGTGGCAGCACACAAGGTGTTGTGGAATTGATGATTCTGAGACAGTTCCACCACTTTTTGTGTGCTCTGGCTGCTGTGACACACTTGTGCCACCAAGGATTGAGTCTTTACCATTTTCTGCTGTGGATTCTTATCTGGTTTCACCTGAGCCTACACATTTGCTGGAGTATGGATATGGTTACTGA 2091 0.4591 MSFSLIEACKKRRRWPKIFRFHSFADPGCPIAPSGPFRDNVRTFLQECAELEDYVVQNHPLWCTLLVSDKTNLMAPLYTLEENVYNSSHPFCDHCRCAGWSGHFVSKRRYHFIIPMDNGWHKPLTEGALDNQSHLLHGVIHCNGYGHLVCINGIEGGSNVLSGREIMDLWDRICTNLRARKIAVEDVSRKRCMDLRLLHGVAYGHSWFGRWGYKFCRGSFGVTVQNYYEAIEALGSLDLDEIVRDLTLSKIKCHKEIKQIVRCYRDMSETQITTMRDLLRFMLTVKSRAPSSKTSVNCAAPPSAFISRNSSKHALSHRSNPLKDKSARYKKFSTAVANMDSRWPTRRLEFAAQVIVDALKEHKAVKSGSGGMTRQDVRDAARLHIGDTGLLDYVLKSLNNLIVGNYVVRRMVNPSTRILEYTIHELGNGFKSPEAVMEPEVMTLVDPQGESSRVPGNDVYSDVFYLYKNVLLGYPNSESVDLAVQIVVDSRHFVKEWEYMDEMEQVLTFICRLKPNFVDIKSELSREPPCGEIVMVPLHSTVGDLKHAAEAALRDTYCIAERLIVTDITELMNAGDEEVLFGVIQSGVELCVRGIALDLCTPLKYQGGSDNWKVRCECGAQDDDGERMVACDICEVWQHTRCCGIDDSETVPPLFVCSGCCDTLVPPRIESLPFSAVDSYLVSPEPTHLLEYGYGY* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2273 696 SMART PHD_3 615 661 IPR001965 -
Aev07g2273 696 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 10 666 - -
Aev07g2273 696 CDD PHD_MMD1_like 616 660 - -
Aev07g2273 696 SUPERFAMILY FYVE/PHD zinc finger 608 667 IPR011011 -
Aev07g2273 696 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 603 664 IPR013083 -
Aev07g2273 696 ProSitePatterns Zinc finger PHD-type signature. 616 660 IPR019786 -
Aev07g2273 696 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 10 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2273 Aev-Chr7 23646764 23649402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2273 10 666 PHD Transcription Factor Family AT5G22260 31.876 1.67e-117 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2273 - - mtr:MTR_5g077750 1105.89