LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev07g2257	ATGTCGCCACTTTCCTTCTTCTTCTTCTTCATCTTCAACTTCAATGGCATTACCGTAATTTCAACTACCGAATTCGACTTCGGAACCTTAACGTTAAGTAGCCTCAAGCTTCTCGGCGATGCCCACTTGAACAACGGAACCGTGAGTCTCACGCGCGACCTCGCCGTCCCTAATTCCGGCGCCGGAAGAGCTTTATATTCCCGTCCGGTTAAATTCCGGCAACCCGGAACACATTCTCTGGCCAGCTTCCGAACCTTCTTCTCATTCTCCGTCACGAATCTCAACCCATCCTCCATCGGCGGCGGCCTCGCGTTTCTCCTTTCCCCCGACGAAGACTCCCTCGGCGCCGCCGGCGGAAGCCTTGGCCTTGCCGGAGAAACCACTACCGCCGCCGCTAATTTCGTGGCCGTGGAATTCGACACGTTGATGGACCTCGAATTCAAGGACATTAATGGAAACCACGTTGGTGTGGACCTCAACACAATGGTTTCAACACAGAGCTTCGATTTGGGTTCCATTGATGTCGATCTCAAGAGCGGTGACACAGTAAACGCGTGGATCGAGTTCGATGGAGAAACAGAGGGGTTAAGCATTTGGGTCTCGTACTCGAATCTGAAACCCAAAGACCCGATTTTAACGATGAATCTAGATTCTGATAAATACTTCACTGATTTTATGTATGTGGGGTTCTCTGCTTCAACACAAGGAAGCACTGAGACCCACAGTGTTGAATGGTGGAGTTTCAGCTCCTCTTTTGACTCCACGGCGGTGACGGCGGTGGCGCCGCCGCCACCACCGCCGGCGGTGACTCTTATGAACCCCGGTGCTAACTCTGTTGGGTCAGCACCACCTTCATTAGCACCTTCTTCTTCATCATCATCTCAGCAAAAAGAGAGTAAATCCTCTTCTTGCCACAATGGTTTGTGTAAGGAAGGATTGGGTGCTGTTGCTGGTGTTGTAACTGCTGGGGCTTTTGTTCTTGCTTTGTTTGCTGGTGCTTTGATTTGGGTTTATTCCAAGAAGTTCAAAAGTGTTAAGAAGTGTGATTCTTCACTTGGGTCTGAGATCATCAAGATGCCTAAGCAGTTTAGCTATAAGGAGCTTAAGGCGGCTACAAAATGCTTCAATGCTAATAGGATAATTGGTCATGGGGCTTTTGGTACTGTGTATAAGGGGATTATGCCTGAGAATGGTGACATTGTTGCTGTGAAGAGGTGTAGCCATAGTAGTCAGGGTAAGAATGAGTTCTTATCTGAGTTGTCTATAATTGGAACCCTAAGGCATAGGAATCTTGTTAGGCTTCAGGGTTGGTGCCATGAGAAAGGTGAGATTTTGCTTGTTTATGACTTGATGCCTAATGGGAGTTTAGATAAGGCTCTGTTTGAGGCAAGGACTCCTCTGCCTTGGCCTCATAGGGGCAAGATTTTGTTCGGCGTCGCGTCGGCATTGGCCTACTTGCATCAGGAATGTGAGAATCAGGTTATCCATAGGGACATTAAGACTAGTAACATAATGTTGGATGAAGGGTTCAATGCTAGGTTGGGGGATTTTGGTTTGGCTAGGCAGACAGAGCATGACAAGTCACCGGACGCCACAGTGGCGGCCGGGACAATGGGGTACTTGGCGCCTGAGTACCTCCTTACTGGTAAAGCTACAGAGAAGACTGATGTGTTCAGTTACGGCGCGGTGGTCCTTGAGGTGGCGAGTGGGAGAAGGCCTATTGAGAAGGATGCCACTGGGGCTGGTAAAATTGGGGTTAGCAGCAATTTGGTGGAATGGGTTTGGAGTTTGCATAGGGAAGGAAGGTTGATAAATGCAGCTGATCCGAGGCTCGAGGGCGAGTTCGACGAGGCCGAGATGAGGAGGGTGCTATTGGTTGGACTAGCTTGTTCCCACCCTGACCCATTGGCTAGGCCTACAATGAGGAATGTGGTTCAGATGCTTGTTGGTGAGGCTGAAGTTCCTATTGTACCAAGAACAAAACCTTCCACAGGTTTTAGCACCTCACACTCTCACCTCTTACTTAGCTTGCAAGATAGTGTATCAGATTGTGATGGAATAATCACCATTTCTACATCATCATCAGATAACAGCTTCAATCTTGGAGATTTAGTATAG	2118	0.4863	MSPLSFFFFFIFNFNGITVISTTEFDFGTLTLSSLKLLGDAHLNNGTVSLTRDLAVPNSGAGRALYSRPVKFRQPGTHSLASFRTFFSFSVTNLNPSSIGGGLAFLLSPDEDSLGAAGGSLGLAGETTTAAANFVAVEFDTLMDLEFKDINGNHVGVDLNTMVSTQSFDLGSIDVDLKSGDTVNAWIEFDGETEGLSIWVSYSNLKPKDPILTMNLDSDKYFTDFMYVGFSASTQGSTETHSVEWWSFSSSFDSTAVTAVAPPPPPPAVTLMNPGANSVGSAPPSLAPSSSSSSQQKESKSSSCHNGLCKEGLGAVAGVVTAGAFVLALFAGALIWVYSKKFKSVKKCDSSLGSEIIKMPKQFSYKELKAATKCFNANRIIGHGAFGTVYKGIMPENGDIVAVKRCSHSSQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRGKILFGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDATGAGKIGVSSNLVEWVWSLHREGRLINAADPRLEGEFDEAEMRRVLLVGLACSHPDPLARPTMRNVVQMLVGEAEVPIVPRTKPSTGFSTSHSHLLLSLQDSVSDCDGIITISTSSSDNSFNLGDLV*	706

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev07g2257	705	ProSitePatterns	Legume lectins beta-chain signature.	135	141	IPR019825	-
	Aev07g2257	705	Pfam	Legume lectin domain	24	254	IPR001220	GO:0030246
	Aev07g2257	705	SMART	serkin_6	375	648	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev07g2257	705	CDD	lectin_legume_LecRK_Arcelin_ConA	39	243	IPR001220	GO:0030246
	Aev07g2257	705	ProSitePatterns	Protein kinases ATP-binding region signature.	381	404	IPR017441	GO:0005524
	Aev07g2257	705	ProSiteProfiles	Protein kinase domain profile.	375	657	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev07g2257	705	Gene3D	Transferase(Phosphotransferase) domain 1	451	654	-	-
	Aev07g2257	705	SUPERFAMILY	Protein kinase-like (PK-like)	357	672	IPR011009	-
	Aev07g2257	705	Pfam	Protein kinase domain	376	646	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev07g2257	705	PANTHER	-	20	696	-	-
	Aev07g2257	705	Gene3D	-	21	261	-	-
	Aev07g2257	705	MobiDBLite	consensus disorder prediction	274	303	-	-
	Aev07g2257	705	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	494	506	IPR008271	GO:0004672\|GO:0006468
	Aev07g2257	705	CDD	STKc_IRAK	381	648	-	-
	Aev07g2257	705	MobiDBLite	consensus disorder prediction	263	303	-	-
	Aev07g2257	705	SUPERFAMILY	Concanavalin A-like lectins/glucanases	21	266	IPR013320	-
	Aev07g2257	705	Gene3D	Phosphorylase Kinase; domain 1	337	450	-	-
	Aev07g2257	705	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2	20	696	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev07g2257	Aev-Chr7	23521862	23523979	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev07g2257	4	687	Receptor kinase-like Gene Family	AT3G53380	70.707	0.0	940

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Aev07g2257		Pkinase	8e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev07g2257	-		-	gmx:100810624	1048.88