Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2253 ATGAAGATTCAAGATCAAAGTGGAGAATCTTTCATTTCTGGATCACATTCTGTTTCACGTATTCAATTAAATGATCAATTTTCTTGTGGAAATGATTATGCTCCTAAGGTGAGGAAACCATATACCATCACGAAGCAGCGAGAGCGATGGACAGATGAAGAGCATAAGAAGTTCCTCGAAGCTCTTAAGCTTTACGGCCGCGCCTGGCGACGAATCGAAGAACATGTTGGCACAAAGACTGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTGTTCGAGATTCCGGTGGGAGCAATACGAGCTTGGTGGAGCCAATTGAGATTCCGCCTCCACGACCGAAGCGAAAGCCTATGCATCCTTACCCTCGTAAACTAGTAGACATTCTCAATCGAGAAATTTTCAACACAGAGCATCCAATGAGGTTTAATTCTGCCAAGTCGTTGGATTTTGATCAAGAAAACAAATCTCCCAAGTCAGTGTTATCTGCAGTCATCTCAGAAACCCTTGGTTCCTCGGATTCGGATACACCAACCGGAAGTTTATCCCCGGTATCATCCATTAGCGGTGTCCATAACAGTAGCTTTGCAATTGCTGAACAGAAAACACCATTCGAGGAAGATCAGTCTCCATCACCGATTGGACTAAATGCTTGTTCTGTTCATTATGAGCACCCTATTGTGAAACTTGAGCCTTTCCACAAAGAAAGTGTTTCTACCAAAGACGATGCTGCAGAAGAATCATCTGGCCGCACTCTAAAACTTTTTGGTGCGACTCTTATGTTATCAGATACCTGCAGATCACCATCTTCATCACTTATTGAGGTATGCAAACCAATACCTGCTGCGATGAATGTTACTCAGCTTCAGGGTAGAAATTTGGATGCTGCAGAAGCTCCTACAACTGTTGTCCCTTGGTGGAGGCCATTCATGGCACTGCACAAGGAACCAAAGGGGGAAAATCTAGATGATTCTGATCACGGCGAGTTTGAAAGCAAAGAAATTCAAAAGGAGGAAGGATCATGGACCGATTCGAACACTAGTTCGGTTAGTGATGAAGAGAACAATGTAGAGAAAACTCTAGATCAAGTTAAAAGTCATGTGAATTTTTACCAAATTGGCAAGAATACACCAAGTGAAGCATCAACTATATCTAAGCTAAGAGTAAGGTCTAAAACCTGTGGAAAAGGGTTTGTACCATATAAAAGGTGCATGTCAAATAATAGGGAAAGTCATTGCTACTCACAAGTAACAAGTGAGAAGAGGGAAGAGCAATCGATTAGGCTTTCCTTATAG 1305 0.4215 MKIQDQSGESFISGSHSVSRIQLNDQFSCGNDYAPKVRKPYTITKQRERWTDEEHKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKVVRDSGGSNTSLVEPIEIPPPRPKRKPMHPYPRKLVDILNREIFNTEHPMRFNSAKSLDFDQENKSPKSVLSAVISETLGSSDSDTPTGSLSPVSSISGVHNSSFAIAEQKTPFEEDQSPSPIGLNACSVHYEHPIVKLEPFHKESVSTKDDAAEESSGRTLKLFGATLMLSDTCRSPSSSLIEVCKPIPAAMNVTQLQGRNLDAAEAPTTVVPWWRPFMALHKEPKGENLDDSDHGEFESKEIQKEEGSWTDSNTSSVSDEENNVEKTLDQVKSHVNFYQIGKNTPSEASTISKLRVRSKTCGKGFVPYKRCMSNNRESHCYSQVTSEKREEQSIRLSL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2253 434 CDD SANT 49 92 IPR001005 -
Aev07g2253 434 MobiDBLite consensus disorder prediction 320 343 - -
Aev07g2253 434 SMART sant 46 94 IPR001005 -
Aev07g2253 434 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 45 94 IPR006447 GO:0003677
Aev07g2253 434 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 96 IPR017930 -
Aev07g2253 434 PANTHER PROTEIN REVEILLE 7-RELATED 9 417 - -
Aev07g2253 434 SUPERFAMILY Homeodomain-like 41 94 IPR009057 -
Aev07g2253 434 PANTHER SWI/SNF COMPLEX-RELATED 9 417 - -
Aev07g2253 434 ProSiteProfiles Myb-like domain profile. 42 92 IPR001005 -
Aev07g2253 434 MobiDBLite consensus disorder prediction 320 359 - -
Aev07g2253 434 Pfam Myb-like DNA-binding domain 47 90 IPR001005 -
Aev07g2253 434 Gene3D - 49 96 - -
Aev07g2253 434 ProSiteProfiles SANT domain profile. 45 96 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2253 Aev-Chr7 23471786 23474646 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev07g2253 Myb_DNA-binding 1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2253 - - gmx:778060 499.975