Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2225 ATGATCTCCGGATTTCCATTTGTGAAGATGGCAAGGGGTTTGACAGGAAACGAGTATGAAGAGGCTAGGAAGCAAAGACTTGAGGAAAACAAGAAGAAGCTTGAGGACTTGAGGCTCTCAGCTATCTCCAAGGATTTGACTGGATTTGCAACTTCTGCTCAGAAGTCTCCGCTTCGTACTCCTAAACTGAAAGCAAAGGCTATTGTGGCAGTGGAACCAAGGCGTTCTTCTCGCGAACGAAATGGAGTTCCTTCATACCGTGAAGATGTTGGCTTGGAACTTCCATCTTCGCGGAAGAGGCCAAGGTCTAGCTCATTATCATGCTTAAGCTACATTGCAAGGCCACTTGAAGAGATAAAGGTGGCTACCGATGGAGAAAGAGCTCGTGCTTTGGCAGCTGCAGAGGCATTGAAAAACAATTTGCAGTCTATAAATCCATTGTTTGTTAAGTCAATGGTCCGGTCTCATGTTTATAGCTGCTTTTGGTTGGGTCTCCCTTCGAAATTTTGTGAGCACTATCTTCCAAAGACTCTGCACAAAATGGTTTTAGAGGATGAAAATGGTGCGGAATATGAGGCTGTCTATATTGGCAGCAGAGCTGGTTTAAGCGGCGGCTGGCGAGCATTTGCATTGGACCATAAGTTGGATGATGGTGATGCACTTGTCTTTGAACTGGTTGAAGCAAGAAGATTTAAGGTTTATATTGTCAGAGCATTTCCAGATTCAGCTGAAAATGATGGAAAGCAGAGTTCTGAGGAAGGAGCTAAGTTTGCAATAAAAGCAGCACCAAAGGCCAGCAAGAAGGAGAAACCAGAATCCAGCAAGGCTAGAAAGCAAAAACAGGTCATTCAGTCTGAAGTTATTGATTTAACAAGCTCTGATGAAGATGTGCCAGAGCGCATCGCTGACAAGGAAGTCAAATCAAAGAAGAAAGCGGTTTCAACATCGAGAGCTCAAGGCTCTGTGCGAAAGTCGCAGAAGAAACCCGAAGAGAAGAAAGAAGCACTAGTTGCAGCTGAGAAGCCGAAAGCAGCTGCAAAGCCTAAAGCTCAAGCAAAGAAGGCAGAAGAAAGTGCTGCTAAGGAAAATGGTGTTCCAAGCAAGGTTGGACTGGAAAAGTTTGCTGAGATTGACCTCAACAAAGAACCAGTTGAAGAAGAAACCAAGAGTGTTTCAAAGGCACCAAGGAAGAAGCCAGCTCCTAAGCTTTTCAGGAAGAGGGCTTAG 1227 0.4482 MISGFPFVKMARGLTGNEYEEARKQRLEENKKKLEDLRLSAISKDLTGFATSAQKSPLRTPKLKAKAIVAVEPRRSSRERNGVPSYREDVGLELPSSRKRPRSSSLSCLSYIARPLEEIKVATDGERARALAAAEALKNNLQSINPLFVKSMVRSHVYSCFWLGLPSKFCEHYLPKTLHKMVLEDENGAEYEAVYIGSRAGLSGGWRAFALDHKLDDGDALVFELVEARRFKVYIVRAFPDSAENDGKQSSEEGAKFAIKAAPKASKKEKPESSKARKQKQVIQSEVIDLTSSDEDVPERIADKEVKSKKKAVSTSRAQGSVRKSQKKPEEKKEALVAAEKPKAAAKPKAQAKKAEESAAKENGVPSKVGLEKFAEIDLNKEPVEEETKSVSKAPRKKPAPKLFRKRA* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2225 408 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 14 247 IPR044837 -
Aev07g2225 408 SUPERFAMILY DNA-binding pseudobarrel domain 143 237 IPR015300 -
Aev07g2225 408 Gene3D - 122 239 IPR015300 -
Aev07g2225 408 MobiDBLite consensus disorder prediction 260 408 - -
Aev07g2225 408 MobiDBLite consensus disorder prediction 74 96 - -
Aev07g2225 408 ProSiteProfiles B3 DNA-binding domain profile. 148 239 IPR003340 GO:0003677
Aev07g2225 408 SMART B3_2 148 239 IPR003340 GO:0003677
Aev07g2225 408 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS05G0481400 14 247 - -
Aev07g2225 408 MobiDBLite consensus disorder prediction 323 361 - -
Aev07g2225 408 Pfam B3 DNA binding domain 148 237 IPR003340 GO:0003677
Aev07g2225 408 MobiDBLite consensus disorder prediction 293 312 - -
Aev07g2225 408 MobiDBLite consensus disorder prediction 74 103 - -
Aev07g2225 408 MobiDBLite consensus disorder prediction 262 279 - -
Aev07g2225 408 Coils Coil 17 44 - -
Aev07g2225 408 MobiDBLite consensus disorder prediction 374 394 - -
Aev07g2225 408 CDD B3_DNA 146 237 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2225 Aev-Chr7 23232339 23237790 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2225 19 238 B3 DNA Binding Superfamily AT5G58280 49.799 4.65e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev07g2225 B3 5.7e-17 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2225 07 23232339 23237790 Aev07g2225 07 23232339 23237790 ECH