Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2220 ATGTCCGTACAGTCAACACTGAAGCTCGAGAAGCTGAAGCTCTCATCACCATGTTCAGATTTTGAAGGTGACCCACCATTCAAATCGAAGCTCAAAACCCAACAAAAGCAACAAAAGCTGGTTCGGATCATTCTCACTGATCACGATGCTACTGATTCAGACTCATCAAGCGACGAAGAAGAACAAACAGAGAGAGGAATTAAGCCGCGGAAGCTGAAAAGAGAGATCACACAAATCACTATGAACCTTCATCCTTCACCTGATTCCTCAATCATCACTTCTTCTTCTTCCCCTTCTTCATCTTCTTACTCTTCTTCTTCAACCTTCTCTTCTAATTCTTCTTCACAACAAAAACCCAAATCAACCAAGAGGGCTAAGAAGCCCTCACTGCCAGCGGCGGCGGCGGAGCGCCGCCGTAACAGGTTTCGCGGCGTGCGGCAACGGCCGTGGGGACGGTGGGCTGCTGAGATTCGTGACCCGACCCAGAGAAAACGGGTTTGGTTGGGGACGTTTGACACGGCGGAGGAAGCTGCCACCGAGTACGACAGGGCGGCGGTGAAACTTAAAGGACCTAACGCCGTCACCAATTTTCCGGTGACTTCGTTTGCGGCGGAGGACACGGCGGCGATTTCTGTGGACGACGGTGGTGTTTTGTTTTCCGAGACGGTGGCGCTTTCTCCTACTTCTGTTTTACCTTACGACGGAGACTCGACGCCGTTTGACGGTTTCCGTTACGGTGACGTGGACGCGTTTGGGTTCGAAGTCCTTGATGAGCCGTTAAGTTTGCCGGACGTTGGGTTTAACGTTATGCTGACGCGTCAGCGGTTTTCGGAGGAGGAAGAAGCGTTCGGTGAATTTGACATTGATGAGTTTATTACGTGGCCGTACTAA 891 0.5107 MSVQSTLKLEKLKLSSPCSDFEGDPPFKSKLKTQQKQQKLVRIILTDHDATDSDSSSDEEEQTERGIKPRKLKREITQITMNLHPSPDSSIITSSSSPSSSSYSSSSTFSSNSSSQQKPKSTKRAKKPSLPAAAAERRRNRFRGVRQRPWGRWAAEIRDPTQRKRVWLGTFDTAEEAATEYDRAAVKLKGPNAVTNFPVTSFAAEDTAAISVDDGGVLFSETVALSPTSVLPYDGDSTPFDGFRYGDVDAFGFEVLDEPLSLPDVGFNVMLTRQRFSEEEEAFGEFDIDEFITWPY* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2220 296 MobiDBLite consensus disorder prediction 79 119 - -
Aev07g2220 296 ProSiteProfiles AP2/ERF domain profile. 141 198 IPR001471 GO:0003700|GO:0006355
Aev07g2220 296 SUPERFAMILY DNA-binding domain 141 199 IPR016177 GO:0003677
Aev07g2220 296 SMART rav1_2 141 204 IPR001471 GO:0003700|GO:0006355
Aev07g2220 296 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI6-LIKE 124 291 - -
Aev07g2220 296 MobiDBLite consensus disorder prediction 14 145 - -
Aev07g2220 296 PIRSF PTI6 7 296 IPR017392 GO:0003700
Aev07g2220 296 Pfam AP2 domain 141 190 IPR001471 GO:0003700|GO:0006355
Aev07g2220 296 MobiDBLite consensus disorder prediction 60 77 - -
Aev07g2220 296 PRINTS Ethylene responsive element binding protein signature 164 180 IPR001471 GO:0003700|GO:0006355
Aev07g2220 296 PRINTS Ethylene responsive element binding protein signature 142 153 IPR001471 GO:0003700|GO:0006355
Aev07g2220 296 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 35 86 - -
Aev07g2220 296 CDD AP2 147 200 IPR001471 GO:0003700|GO:0006355
Aev07g2220 296 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 124 291 - -
Aev07g2220 296 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI6-LIKE 35 86 - -
Aev07g2220 296 Gene3D AP2/ERF domain 140 200 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2220 Aev-Chr7 23175827 23176717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2220 39 233 AP2-EREBP Transcription Factor Family AT4G27950 42.574 8.06e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev07g2220 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2220 K13434 - gmx:100800489 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2220 07 23175827 23176717 Aev07g2220 07 23175827 23176717 ECH
Aev01g1114 01 11601468 11626387 Aev07g2220 07 23175827 23176717 PCT