Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2213 ATGGCTAGGTCCAAATTGAAGCTCGAATACATATCTAATGACTCTACAAGGAAGACAACATTTAAAAAGAGAAAGAAGGGAATTATGAAGAAGCTTAAAGAATTAACCATCCTTTGTGGTGTTGAAGGTTGTGTCATTGTGTATGAGTCCAAAAATGAATCCAATGCTGAAATTTGGCCCTCCCAAAATAATGAGGTTCGTAGAGTTCTAAATAGATTCTTCATTATGTCCAAAACCAATCAAAAAGATGATAAGATGTTGGACCAAAGATCGTACTTGAGACAGAGGATCAAAAAGGCGAAGGAGCAATTGATGAAGAAATTGAGGGCTAACAGAGAGAAGGAGATGGTGATTCGCATACGTGGGCTTGTTAAGTCAAGGGAGCTTCCAGAGAATCTAACCATGGATGAACTAAATACCCTTGCATATGTTAATGACCAAGAGATGAAGAAGCTCGAAGCACAATTGAAGGAGAGAAAGGAAAAAGATGACAAGAAAATGAAGATGGTAGTGGTGAGGGATTCTACCTCATTATCACCACCATCATCATCATTTGTGTCCTTCCCATGA 570 0.386 MARSKLKLEYISNDSTRKTTFKKRKKGIMKKLKELTILCGVEGCVIVYESKNESNAEIWPSQNNEVRRVLNRFFIMSKTNQKDDKMLDQRSYLRQRIKKAKEQLMKKLRANREKEMVIRIRGLVKSRELPENLTMDELNTLAYVNDQEMKKLEAQLKERKEKDDKKMKMVVVRDSTSLSPPSSSFVSFP* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2213 189 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 53 IPR002100 GO:0003677|GO:0046983
Aev07g2213 189 Gene3D - 13 97 IPR036879 GO:0003677|GO:0046983
Aev07g2213 189 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev07g2213 189 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev07g2213 189 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev07g2213 189 MobiDBLite consensus disorder prediction 175 189 - -
Aev07g2213 189 MobiDBLite consensus disorder prediction 159 189 - -
Aev07g2213 189 SMART madsneu2 1 61 IPR002100 GO:0003677|GO:0046983
Aev07g2213 189 SUPERFAMILY SRF-like 1 83 IPR036879 GO:0003677|GO:0046983
Aev07g2213 189 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 3 161 - -
Aev07g2213 189 Coils Coil 94 114 - -
Aev07g2213 189 ProSiteProfiles MADS-box domain profile. 1 53 IPR002100 GO:0003677|GO:0046983
Aev07g2213 189 PANTHER MADS BOX PROTEIN 3 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2213 Aev-Chr7 23111669 23112238 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2213 1 152 Type I MADS-box Gene Family AT3G05860 41.447 1.20e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aev07g2213 SRF-TF 2.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2213 - - ahf:112766956 123.25