Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2212 ATGGCTAAGTCTGAATTGAAGCTCGAATACATATCCAATGACTCTGCAAGGAAGACAACATTCAAAAAGAGGAAGAAGGGAATTATGAAGAAGCTTGAAGAATTAACCACCCTTTGTGGTGTTGAAGGTTGTGCCATTATGTATGAGTCCAAGAATAAATCTAATGCTGAGACTTGGCCCTCCCAAAATACTGGGGTTCGTAAGGTTCTTAATAGATTCTTTACTATGTCCAAAACCAATCAAAAGGACAAGATGTTGGACCAGAGATCGTTCTTGAGTCAGAGAATCAAGAAGGCGAAGAAGCAATTGATGAAGAAGTTGAGGACTAACAAAGAGAAGGAGATGATCATTCGCATGCATGAGATTGTTAAGTCAAAGGAGCTTCCCAAGAATCTAAGCATGGATGAATTGAAAGCCCTAGCATATGTTAATGACCAAGAGATGAAGAAGCTAGAAGCGCAATTGAAAGGGACAAAGGAAAAAGATGATGAGAAAATGAAGATGGAGATGATGAGGGCTTCTGCCTCATCATCGTCATCATTTGTGCCCTCCTAG 555 0.4018 MAKSELKLEYISNDSARKTTFKKRKKGIMKKLEELTTLCGVEGCAIMYESKNKSNAETWPSQNTGVRKVLNRFFTMSKTNQKDKMLDQRSFLSQRIKKAKKQLMKKLRTNKEKEMIIRMHEIVKSKELPKNLSMDELKALAYVNDQEMKKLEAQLKGTKEKDDEKMKMEMMRASASSSSSFVPS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2212 184 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev07g2212 184 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev07g2212 184 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev07g2212 184 MobiDBLite consensus disorder prediction 156 184 - -
Aev07g2212 184 SMART madsneu2 1 61 IPR002100 GO:0003677|GO:0046983
Aev07g2212 184 PANTHER MADS BOX PROTEIN 5 164 - -
Aev07g2212 184 ProSiteProfiles MADS-box domain profile. 1 53 IPR002100 GO:0003677|GO:0046983
Aev07g2212 184 SUPERFAMILY SRF-like 3 98 IPR036879 GO:0003677|GO:0046983
Aev07g2212 184 Coils Coil 82 102 - -
Aev07g2212 184 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 53 IPR002100 GO:0003677|GO:0046983
Aev07g2212 184 MobiDBLite consensus disorder prediction 156 170 - -
Aev07g2212 184 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 5 164 - -
Aev07g2212 184 Gene3D - 13 95 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2212 Aev-Chr7 23109444 23109998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2212 1 151 Type I MADS-box Gene Family AT5G48670 44.371 1.08e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aev07g2212 SRF-TF 2.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2212 - - gmx:100816084 140.198