Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2211 ATGGCTAAGTCTGAATTGAAACTCGAATACATATCCAACGACTCTGCAAGGAAGACAACATTCAAAAAGAGGAAGAAGGGAATTATGAAGAAGCTTGAAGAATTAACCATCCTTTGTGGTGTTGAAGGTTGTGCCATTATGTATGAGTCCAAAAATAAATCCAATGCTGAGACATGGCCCTCCCAAAATACTGGGGTTCGTAGGGTTCTTAATAGATTCTTCACTATGTCCAAAACCAATCAAAAGGGCAAGATGTTGGACCAGAGATCGTTCTTAAGACAGAGAATCAAGAAGGCGAAGAAGCAATTGATGAAGAAGTTGAGGGCTAACAAAGAGAAGGAGATGATCATTCGCATGCGTGAGATTGTTAAGTCAAAGGAGCTTCCCGAGAATCTAAGCATGGATGAATTGAAAGCCCTAGCATATGTTAATGACCAAGAGATGAAGAAGCTAGAAGCGCAATTGAAAGAGACAAAGGAAAAAGATGATGAGAAAATGAAGATGGAGATGATGAGGGCTTCTGCCTCATCATCGTCATCATCATTTGTGCCCTCCCAGTGA 561 0.4082 MAKSELKLEYISNDSARKTTFKKRKKGIMKKLEELTILCGVEGCAIMYESKNKSNAETWPSQNTGVRRVLNRFFTMSKTNQKGKMLDQRSFLRQRIKKAKKQLMKKLRANKEKEMIIRMREIVKSKELPENLSMDELKALAYVNDQEMKKLEAQLKETKEKDDEKMKMEMMRASASSSSSSFVPSQ* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2211 186 Coils Coil 93 113 - -
Aev07g2211 186 Coils Coil 148 168 - -
Aev07g2211 186 MobiDBLite consensus disorder prediction 157 186 - -
Aev07g2211 186 SUPERFAMILY SRF-like 3 98 IPR036879 GO:0003677|GO:0046983
Aev07g2211 186 Gene3D - 13 99 IPR036879 GO:0003677|GO:0046983
Aev07g2211 186 MobiDBLite consensus disorder prediction 172 186 - -
Aev07g2211 186 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 53 IPR002100 GO:0003677|GO:0046983
Aev07g2211 186 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 5 164 - -
Aev07g2211 186 SMART madsneu2 1 61 IPR002100 GO:0003677|GO:0046983
Aev07g2211 186 ProSiteProfiles MADS-box domain profile. 1 53 IPR002100 GO:0003677|GO:0046983
Aev07g2211 186 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev07g2211 186 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev07g2211 186 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev07g2211 186 PANTHER MADS BOX PROTEIN 5 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2211 Aev-Chr7 23104121 23104681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2211 1 151 Type I MADS-box Gene Family AT5G48670 44.079 1.47e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aev07g2211 SRF-TF 3.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2211 - - gmx:100816084 140.198