Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2208 ATGGTCAGGTCAAAAGTGAAGATATCATACATAGCCAATGAGGCATTGAGGAAGAAAACACTGCAGAAAAGGAAAAAGGGTATTATGAAGAAAATCAACGAACTAACCACTCTTTGTGGTGTGGAAGCTTGTGCCATTGTGTATGATTCCACAACTGAAAATTCTCAGCCTGAGATTTTTCCTCCGTCACACACGGAGGTCCGAAGGGTGCTTAACAAATTCTCCAGCATGCCCAAATACAACCAAACCAATAAGATGCAGGACCAGCGGTCGCACTTGAAACAAAGGATTCAGAAGGCAAATGAGAAGTTGATGAAGAAGAGGAGGGCAAATAGGGAGAAGGAGATGGCCATTCGCATCGATGAGTTTGTTCAGACAATGAAGCTTCCTGATGACTTGAGCTTGGTTGATCTGAATGACATAACATATGTGGCTAACCAGAAGATAAGGGAAATCGACAATCAATTGAATGAGATAAAGAAGAAGAAGGAAGAGGAGGAAATGCGACAAATGATGCCGATGATGGGGGACTTTCCTGCATCATCGTCATCATCTGTGTTTGCTCCTCAAGACGGAGCGGCCTATGGTAACGGTGGATTGGAGATGATTTTGTATGGTAATCAAAGGCGGGAGTGA 636 0.4355 MVRSKVKISYIANEALRKKTLQKRKKGIMKKINELTTLCGVEACAIVYDSTTENSQPEIFPPSHTEVRRVLNKFSSMPKYNQTNKMQDQRSHLKQRIQKANEKLMKKRRANREKEMAIRIDEFVQTMKLPDDLSLVDLNDITYVANQKIREIDNQLNEIKKKKEEEEMRQMMPMMGDFPASSSSSVFAPQDGAAYGNGGLEMILYGNQRRE* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2208 211 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 4 175 - -
Aev07g2208 211 SUPERFAMILY SRF-like 3 98 IPR036879 GO:0003677|GO:0046983
Aev07g2208 211 Gene3D - 14 99 IPR036879 GO:0003677|GO:0046983
Aev07g2208 211 PANTHER MADS BOX PROTEIN 4 175 - -
Aev07g2208 211 Coils Coil 83 117 - -
Aev07g2208 211 Coils Coil 145 169 - -
Aev07g2208 211 CDD MADS_SRF_like 3 88 IPR033897 GO:0000981|GO:0000987|GO:0045944
Aev07g2208 211 SMART madsneu2 1 62 IPR002100 GO:0003677|GO:0046983
Aev07g2208 211 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev07g2208 211 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev07g2208 211 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev07g2208 211 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 52 IPR002100 GO:0003677|GO:0046983
Aev07g2208 211 ProSiteProfiles MADS-box domain profile. 1 51 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2208 Aev-Chr7 23094757 23095392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2208 1 165 Type I MADS-box Gene Family AT5G48670 41.566 4.30e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aev07g2208 SRF-TF 1.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2208 - - ahf:112766956 152.14