Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2206 ATGGCATTTAGGGTTTGTTCTACTACTACACTAACTATCTTCATTGTTCTTCTCATTGATGTTCAACTTCAAGGTGTAAGTGCTGACTATGGTGGTTGGCAGAGTGCTCATGCAACTTTCTATGGTGGTGGTGATGCTTCTGGCACAATGGGAGGAGCATGTGGTTATGGGAATTTGTACAGCCAAGGATATGGAACCAACACAGCAGCACTAAGCACTGCTCTGTTCAACAATGGCCTGAGCTGTGGGTCATGTTATGAGATGAGGTGTGCTGATGATCCAAGATGGTGCAAGCCTGCAACAATTGTTGTTACTGCTACAAACTTTTGCCCACCAAATTTTGCTTTGGCTAACAATAATGGTGGATGGTGTAATCCTCCCCTCCAGCATTTTGATATGGCTGAACCTGCTTTCTTGCAAATTGCTCAGTATAGAGCTGGAATTGTGCCTGTGGAATTCAGAAGAGTCCCATGTGTGAAAAAGGGAGGAATAAGATTCACAATCAACGGTCACTCTTACTTCAACCTGGTTTTGATCACCAACGTCGCGGGTGCAGGAGATGTTCATGCAGTCTCAATCAAAGGGTCAAGAACTGGTTGGCAAACTATGTCAAGGAATTGGGGCCAAAATTGGCAAAGCAACTCTTACCTCAATGGACAAAGCCTCTCTTTTCAAGTAACTGCTAGTGATGGTAGAACCGTCACAAGCTATAACGTGGCACCATCTAATTGGCAGTTTGGTCAGACTTTCCAAGGTGATCAATTTTAA 768 0.4401 MAFRVCSTTTLTIFIVLLIDVQLQGVSADYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMRCADDPRWCKPATIVVTATNFCPPNFALANNNGGWCNPPLQHFDMAEPAFLQIAQYRAGIVPVEFRRVPCVKKGGIRFTINGHSYFNLVLITNVAGAGDVHAVSIKGSRTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSYNVAPSNWQFGQTFQGDQF* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2206 255 PRINTS Expansin/Lol pI family signature 146 162 IPR007118 GO:0005576
Aev07g2206 255 PRINTS Expansin/Lol pI family signature 238 252 IPR007118 GO:0005576
Aev07g2206 255 PRINTS Expansin/Lol pI family signature 50 68 IPR007118 GO:0005576
Aev07g2206 255 PRINTS Expansin/Lol pI family signature 72 90 IPR007118 GO:0005576
Aev07g2206 255 PRINTS Expansin/Lol pI family signature 32 47 IPR007118 GO:0005576
Aev07g2206 255 PRINTS Expansin/Lol pI family signature 200 214 IPR007118 GO:0005576
Aev07g2206 255 PANTHER EXPANSIN-A15 10 255 IPR002963 GO:0009664
Aev07g2206 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 51 163 IPR007112 -
Aev07g2206 255 Pfam Lytic transglycolase 68 153 IPR009009 -
Aev07g2206 255 Gene3D - 19 158 IPR036908 -
Aev07g2206 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 173 252 IPR007117 -
Aev07g2206 255 Pfam Expansin C-terminal domain 164 241 IPR007117 -
Aev07g2206 255 SUPERFAMILY PHL pollen allergen 160 252 IPR036749 -
Aev07g2206 255 SMART dpbb_1 68 153 IPR007112 -
Aev07g2206 255 PANTHER EXPANSIN 10 255 - -
Aev07g2206 255 Gene3D - 163 255 IPR036749 -
Aev07g2206 255 SUPERFAMILY Barwin-like endoglucanases 32 181 IPR036908 -
Aev07g2206 255 PRINTS Expansin signature 162 174 IPR002963 GO:0009664
Aev07g2206 255 PRINTS Expansin signature 102 112 IPR002963 GO:0009664
Aev07g2206 255 PRINTS Expansin signature 138 151 IPR002963 GO:0009664
Aev07g2206 255 PRINTS Expansin signature 209 230 IPR002963 GO:0009664
Aev07g2206 255 PRINTS Expansin signature 238 254 IPR002963 GO:0009664
Aev07g2206 255 PRINTS Expansin signature 174 195 IPR002963 GO:0009664
Aev07g2206 255 PRINTS Expansin signature 121 138 IPR002963 GO:0009664
Aev07g2206 255 PRINTS Expansin signature 90 101 IPR002963 GO:0009664
Aev07g2206 255 PRINTS Expansin signature 63 77 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2206 Aev-Chr7 23075583 23078477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2206 11 255 Expansin Gene Family AT2G40610 80.972 1.58e-148 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2206 - - gmx:100816848 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2206 07 23075583 23078477 Aev07g2206 07 23075583 23078477 ECH
Aev07g2206 07 23075583 23078477 Aev08g0673 08 3898890 3899977 ECH
Aev01g1323 01 15052595 15056683 Aev07g2206 07 23075583 23078477 PCT