Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2183 ATGAGGAATAATTTGAAGAGGGATAATGCTACTAATCCATCATCTGTTTTCATCAACAAAGCAGAGGGTCCTGATTTTTTGCCCTTCGAAGGAGGTCCTGCTCGCAAGCTTCCTGAACTGAAGCCGGTGGAGAGCGCTGCCACGGTTTTGTACATCGGTCGGATTCCTCATGGGTTCTATGAGATGGAGATGGAAGGTTTTTTTGGACAATTTGGAACCATTAAGAGGTTGAGAATAGCAAGAAACAAAAAGACAGGAAAAGCAAGACATTTTGGGTTCATTGAATTCGAATCTCCTGAGGTAGCAAAAGTTGTAGCTGATACTATGCACAATTATCTTCTTTTTGAACACCTTCTCCAAGTTCACTTGATACCTCCCGAGGATGTTCATCCAAACTTATGGAGAGGTTTCAGTCACCGGCACAAACCGTTGGATGCAGTTCAAATTGAACGAGAGCGACATGACAAGGAAAGAACATTGGAAGAGCAACAGAAGTTGGTGGAAAGGATTTTGAAGCGTGACAACAAACGACACAAAAGGATTGAGGCTGCTGGCATCGATTACGAGTGCCCTGAGATTGTGGGTAACATCCAACCTGCCCCAAAGAAAATAAAGTTTGTAGACTAA 627 0.4322 MRNNLKRDNATNPSSVFINKAEGPDFLPFEGGPARKLPELKPVESAATVLYIGRIPHGFYEMEMEGFFGQFGTIKRLRIARNKKTGKARHFGFIEFESPEVAKVVADTMHNYLLFEHLLQVHLIPPEDVHPNLWRGFSHRHKPLDAVQIERERHDKERTLEEQQKLVERILKRDNKRHKRIEAAGIDYECPEIVGNIQPAPKKIKFVD* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2183 208 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 48 126 IPR000504 GO:0003723
Aev07g2183 208 Gene3D - 32 123 IPR012677 -
Aev07g2183 208 PANTHER MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN 10 206 - -
Aev07g2183 208 PANTHER - 10 206 - -
Aev07g2183 208 Coils Coil 146 173 - -
Aev07g2183 208 SMART rrm1_1 49 122 IPR000504 GO:0003723
Aev07g2183 208 CDD RRM_NIFK_like 49 122 - -
Aev07g2183 208 SUPERFAMILY RNA-binding domain, RBD 28 136 IPR035979 GO:0003676
Aev07g2183 208 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 50 117 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2183 Aev-Chr7 22902263 22904022 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2183 48 121 Eukaryotic Initiation Factors Gene Family AT1G71770 32.432 1.13e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2183 K14838 - gmx:100814276 329.331