Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2110 ATGTGCAGTGGTTCCAAGAGGAAACCTTGTCAATCTGGTTTGGTCATGGAGGATGGTTATGGAAAACAGGAAGAACTTCCCAGGAAAATTTCCCCTTTGCTTGAATTTTCGGCCGCCGATGATCTAGCCGGCTTCAAAGATGCTGTTGAGAAAGAGGGTCTTGATTTTGATGAGGAAGGGTTGTGGTATGGAAGGAAGATTGGCTCAAAGAAAGTTGGGTATGAAGAGAGGACTCCTCTCATGGTTGCTGCTATGTTTGGAAGCCTAAAAGTATCAGCTTATATTCTCGGATCGGGGCGTGTCGATGTTAACCGGGCTAGTTCCTCAGATGGGGCTACTGCCCTTCATTGTGCTGTCGCTGGTGGTTCTGCTGCTTCCCTTGAGGTTGTCAAGCTCTTGCTTGATTCATCAGCAGACGTTAGCGCCGTTGATGCAAACGGTAACCGGCCGTGTGATTTGATTGTTCCTATGGCCAATTCTGTCTCTAGTTCAAGGAAGAAAGTGCTGCAAGCTTTACTGGAAGGTACTGTTGGTACTGACCAGCCACATGAGGAAGTTGTTGGCCAAATTGAGATGAACACGGCTCGTGTTCCGAAAGATGGGACCGAGAAGAAGGATTACCCTGTTGATCACTCCCTTCCTGACATAAAGAATGGGATATATGGTACTGATGAGTTCAGGATGTATACATTCAAAGTGAAGCCTTGTTCTAGGGCTTATTCTCATGATTGGACTGAGTGCCCCTTTGTTCATCCGGGGGAAAATGCTAGGCGGCGTGATCCGAGGAAATATCATTATAGCTGTGTCCCTTGCCCCGAATTCCGGAAGGGATCGTGCAGCAAGGGAGATGCTTGTGAGTATGCACATGGGATTTTTGAGTGCTGGCTTCATCCTGCTCAGTACCGGACCCGGCTCTGCAAGGATGAGGCTGCGTGTGCGCGAAGAGTTTGTTTCTTCGCGCACAAGCCGGAGGAACTTCGCCCTCTTTATGCCTCTACCGGTTCTGGTGTGCCTTCTCCAAGATCATATTCAGCTAGTTCTTCTTCATTGGAGATGATGGGTTCATTTAGCCCTATCACGCTCGGTTCTCCATCTGCGTTGATTCCACCGACCTCAACTCCACCTCTGACTCCAACCGGATCGTCGTCTCCTCTGGCTGGAGCCATGTGGCAGACTCAATCTAATGTCCCAACCCTGCAGCTTCCGAAAAGCAGATTGAAAACTGCATTAGCTGCTAGAGATATTGACTTGGATGTTGAATTGCTTGAACTCGAAAACAATCGGCTTAGGAAGCAACTATTGATGGATGAGATGGCTGGTCTTTCCTCCCCTTCAAGCTGGAAACATTCCATGATCAATAGTCCATCTTATCCTGCTTCTTTGAGCGATCACGCCGGCGAGTTGAATAGGCTTTCAGGAGTGAAACCTGCTAACCTCGACGCATCAATTTTGTCCAAATTCCATGGAATCTCACTTGATCCTGCAGGAACTCAGATTCGCCAGCAGATGCGAAACTATTCGGCCGGCATATCCTCTTCAAGCATGATTGGATCACCAACTTTTCGGGTTGATCCATCAGCAGAAGCAGCAGCCACAGTGGCTTTGAATCCAAGAATTGCTGCCTTTTCAAACCGGAGCCATAGCTTTATCGAGCGCAGCACGGTGAACCGCCACGCCGATCTTCCTTCCCCTGTTGCCTCAGTAGCAGCAAAGCCTTCTTCTTCTGTCTTCTCTGATTGGGGATCCCCTGATGGAAAGCTGGATTGGGCCGTACACGGCGAAGAACTGAACAAGCTGAGGAAATCTGCTTCATTCGGATTCCGCAGCAGCAGTCCTTCGCCGATGGCCGCATCCAGAATTCCTCCAAATTTCAATGAACCAGATGTGTCTTGGGTCAATTCACTTGTCAAGGATCATTCTCAGCAGCCAGCTGAAGATCAGAAACAACAGCTTCAATGTCATCTCAACAATGGATCAGAAGTGGTTCCTGCTTGGTTGGAACAAATGTACATTGAGCAAGAACAAATGGTGGCATGA 2037 0.4855 MCSGSKRKPCQSGLVMEDGYGKQEELPRKISPLLEFSAADDLAGFKDAVEKEGLDFDEEGLWYGRKIGSKKVGYEERTPLMVAAMFGSLKVSAYILGSGRVDVNRASSSDGATALHCAVAGGSAASLEVVKLLLDSSADVSAVDANGNRPCDLIVPMANSVSSSRKKVLQALLEGTVGTDQPHEEVVGQIEMNTARVPKDGTEKKDYPVDHSLPDIKNGIYGTDEFRMYTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGSCSKGDACEYAHGIFECWLHPAQYRTRLCKDEAACARRVCFFAHKPEELRPLYASTGSGVPSPRSYSASSSSLEMMGSFSPITLGSPSALIPPTSTPPLTPTGSSSPLAGAMWQTQSNVPTLQLPKSRLKTALAARDIDLDVELLELENNRLRKQLLMDEMAGLSSPSSWKHSMINSPSYPASLSDHAGELNRLSGVKPANLDASILSKFHGISLDPAGTQIRQQMRNYSAGISSSSMIGSPTFRVDPSAEAAATVALNPRIAAFSNRSHSFIERSTVNRHADLPSPVASVAAKPSSSVFSDWGSPDGKLDWAVHGEELNKLRKSASFGFRSSSPSPMAASRIPPNFNEPDVSWVNSLVKDHSQQPAEDQKQQLQCHLNNGSEVVPAWLEQMYIEQEQMVA* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2110 678 Pfam Ankyrin repeats (3 copies) 73 143 IPR002110 GO:0005515
Aev07g2110 678 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 270 290 IPR000571 GO:0046872
Aev07g2110 678 ProSiteProfiles Zinc finger C3H1-type profile. 270 292 IPR000571 GO:0046872
Aev07g2110 678 PANTHER UNKEMPT FAMILY MEMBER 19 677 IPR045234 -
Aev07g2110 678 SUPERFAMILY Ankyrin repeat 72 159 IPR036770 -
Aev07g2110 678 Gene3D - 29 176 IPR036770 -
Aev07g2110 678 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 19 677 - -
Aev07g2110 678 ProSiteProfiles Ankyrin repeat profile. 110 145 IPR002110 GO:0005515
Aev07g2110 678 ProSiteProfiles Ankyrin repeat region circular profile. 110 144 - -
Aev07g2110 678 SMART ANK_2a 110 142 IPR002110 GO:0005515
Aev07g2110 678 SMART ANK_2a 75 105 IPR002110 GO:0005515
Aev07g2110 678 SMART c3hfinal6 265 291 IPR000571 GO:0046872
Aev07g2110 678 SMART c3hfinal6 300 323 IPR000571 GO:0046872
Aev07g2110 678 Coils Coil 412 432 - -
Aev07g2110 678 Gene3D - 266 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2110 Aev-Chr7 22185787 22187823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2110 25 673 C2H2 Transcription Factor Family AT5G12850 39.271 2.19e-141 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev07g2110 Ank_2 7.3e-08 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2110 - - aprc:113846970 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2110 07 22185787 22187823 Aev07g2110 07 22185787 22187823 ECH
Aev07g2110 07 22185787 22187823 Aev01g1458 01 17205383 17207296 ECH