Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2097 ATGGGGAAGAAAAGGCGTTTGCATCAATCCAAGCATCCATTCAATGCTTATCCCTTTGAAGCATATGACCGTGGCTCATGGAAAGCTGTGGAGTTCATAAAAGTTGAGGCTGGAGTTATGGTCATCCATTTCGTCGATAAACACCGTATGTCTATGGACAAAGGCCCCTCTGGAGACATACGGGTGAGGTCGAGGAAAGCTACTACATCAGATTGCTCTTGCATTTTACGATCTGGACTTGACGTATGTGTGGAGTTACCCTCCAAAAAAACCGATGATTCCGATGAATCTGGTCAAGAGCCTGTTTGGGCAGATGCTAGAATTAGTTCTATACAGAGAAAGCCCCATGATTCTGAGTGTTCATGTCAGTTTTACGTCAATTTCTATGTAAATCAAGGTTCACTTGGTGCTGAGATAAGGACACTTAAGAAGGAGATTAAAGTAGTTGGTATAAATCAAATCTCCATTCTCCAAAGGCTTGAGCATTTTCATTGTGAAGATCAGCACTATCGATGGGCGTCAACAGAGGATTGCTCCACATTACCACAAACTAGATTGCTTGTGGGGAAATTTTTGCCCGATCTTTCATGGATGATTGTTACGTCTGTTTTAAAGAAGGTCTCATTCTGTGTAAGATCTTTAGAAAACAAGCTTGTGTATCAAGTTTTGGGTAGCGGTGGTGTCGTCCCTCCATTGAATACTAAGGCTCATATAACTGTTGTGAATTTCAAAGTGGAAGAAAATGAAATGGTAGTACCTTTTGTTTCTGAAGTTGTTTATACATCCAACACCGAGACGAATGACGTTGCTCATGAGTGTCATGAAGAGGAAGCGTTAGGATCATATAATGTTGAGGGCTTGCGGCGTTCCAAACGCCGGCATGTACAACCTGAGCGTTACCTTGGTTGCGATAATTCTTCAGAGATCAATGTTGGTACAATTAGAACCAGGCCACCATACAAGATGGGCACATTGGGGGGAGGAGAAGAAGAAAACAAAGATGATGATGAATTGTCATTGCCATTGGCACGCTTGTTTCGTCTGCAACAAAACTGTCCAAAACAGTCTGTTAACAGTACTAAAAAGGTCAATAAGACGGATGGCTCCCCGGAGATTATAGTGTACAATAGGAGGGCTAAAAAGCCCGAGGACGTAAAGTCAGGTGATGTTGTTAAAAAAGAACATCTAAAACCACTTGCTATTATTCCTCATCCTATTCAAGGTGATCCGGTGTCCATTGAGAAGCAACATAATCTCAATGACAAGATTGCAAGAAGTAGTGGACATGAATCCGGTGAAATTCCTTCCAAATATCATCATCTGATCAATAACCATAAACTAAAGAGGAGTAGTATTAATCTGATAAATTTTGAGCCTCATAATCTGCCTGTGAAGTCAGATGATGCAGAAAAAGGCGATGGTTTTTCTTCAAGATGTCATTATATTTATGGTGCGCCGAAGTCACAGAAGAAGAGTCCATATGATATGTATGATATGGATATTGGAACTAATAAATGGGAAGGAATACAATCCAAGAAAGGAGCTCAAGATAAAAAGTACCGTTCGGCATTTTTGAGAAGTAAAAATCCTGGAGAGGAAAGAACTTACAAGGACAGAACCTTAAATGCAGCTGCCTACAAGGAATTGATAAATTCATACTTGAAGAATATCAATGCGAAGCCAACTAATGAAGAACCGGCTGTCACCGACCAGTGGAAGCAATTCCAGGACACACGTAGCGTTGGGCAAACGAGTGAAACAGAAATACCCCATGGAGAGGATGAAGAAGAAACCTCTGAATTGAATATGTTGTGGAGAGAAATGGAAGTGTCATTGGCATCAACTTATCTTGAAGAGGCAGAGGCATCAAATGCAGACGATGTCGCTGAGGCATCAGAAAAGCCAAAGCTAGTGTGTGACCATTACTATAGGCTGGATGACGAAATTGGAATTTGCTGCTTGAAATGTGGCCATGTGGAGACTGACATTAAAGCAATCACACCCCCCTTTATTCAACATCATGTGTGGCACCAAGAGGAGAAGCAGAGCGGTGGAGATGGTCCCGAGCCAAAGGCTGATGAAGATGAAGATTTCAAGCTTGTATCCAATCTTGCTTCTCCTGATGAACCTATATCTTTAGAAACCGATAATGTCTGGGCATTGATTCCTGAACTCGGAAAGAAGTTGCACATCCACCAAAAGAAGGCTTTTGAGTTTCTTTGGAAAAACATTGCAGGGTCTATGGAGCCAGCACTTATGGAATCAAAATCAAGAAAAAGAGGTGGCTGTGTGATATCTCATACTCCTGGAGCTGGAAAAACCTTTCTCATCATTGCATTTCTTGTTAGCTACTTAAAGTTATTCCCGGGGAAGAGACCTCTGGTCCTAGCTCCAAAAACAACACTTTATACTTGGTACAAAGAATTCATCAAGTGGGAGATTCCTATACCGGTGTATCTGGTTCATGGCCGTAGAACCTACAGGGTATTCAACCAGAATACGACGATGCATTTTCCTGGAATGCCGAAGCCTACTGAGGATGTCAAGCATGTTATAGATTGCTTAGAGAAGATACAAAAGTGGCATTCGCACCCGAGTGTACTAATCATGGGGTATACTTCATTTCTAACATTGATGCGAGAGGATTCGAAGTATGCACACAGAAAGTACATGTCTAAAGTATTGAGGGAAAGTCCTGGGCTCCTGGTACTAGATGAAGGACACAATCCAAGAAGCACTAAATCAAGGTTGAGAAAAGTTTTGATGAAAGTACACACAGAACTGAGAATATTACTGTCTGGTACATTGTTCCAAAACAATTTCTGTGAATATTTTAACACTCTCTGCTTGGCAAGACCAAAGTTTCCTCAAGAGGTGCTGAAAGCATTAGATCCGAAATACAAGAGGAAAAAGAAAGGAAAAGAGAAGGCACTGGAGTCGCGGGCTAGGAAATTCTTCTTAGAAAACATTGCTAAGAAAATTGACTCAAATGTTGGTGAGGAGAGGCTGCAAGGTCTGAACATGTTGAGAAATTTAACAAATGGTTTCATCGATAATTATGAAGCCGGGGGTTCTGACGGTCTACCCGGTTTGCAGATTTATACTTTGCTGATGAATTCGACTGATATGCAGCATGATATTTTGAGCAGGCTGCACAAGAAAATGGCTAAGTGCAATGGATACCCTCTGGAGTTAGAGCTTTTGATAACTCTTGGATCAATACATCCTTGGTTGGTCAAAACTGCTGTATGTGCCAATAAGTTTTTCACTATGGCAGAACTGATGGAGCTTGACAAATGCAAGTTTGACTTGAAAATAGGGTCGAAAGTTAGATTTGTTTTGAGCCTTATCTACCGAGTTGTCCAGAAGGAGAAGGTTCTCATCTTTTGTCACAACATTGCACCGGTGAAACTGTTTTTGGAATACTTTGAGAAGTACTTTAAATGGCAAAGAGGTAGAGAAGTTTTGGTTTTAACTGGGGAACTAGAGCTCTTTGAAAGAGGGAGAGTAATGGATAAGTTTGAGGAACCGGGTGGAGCATCAAAAATACTACTAGCTTCAATTACGGCTTGCGCCGAAGGCATTAGTCTGACGGCGGCTTCTAGGGTGATCATGTTGGATTCAGAGTGGAATCCATCGAAAACAAAGCAGGCTATCGCGAGGGCCTTTCGTCCTGGTCAGCAGAAAATGGTTTATGTTTATCAGCTCTTGGTAACGGGTTCGTTGGAGGAAGACAAGTACCGGAGAACCACTTGGAAAGAGTGGGTGTCTAGCATGATCTTCAGCGAGGAGTTCGTCGAGGACCCTTCCCAATGGCAAGCTGAGAAGATCGAAGACGATATACTGAGGGAAATGGTTGCGGAGGACAAGTCTAAGTCATTCCATATGATAATGAAGAATGAAAAGGCTTCAACACAAATGAAAGCATCATAG 3933 0.4183 MGKKRRLHQSKHPFNAYPFEAYDRGSWKAVEFIKVEAGVMVIHFVDKHRMSMDKGPSGDIRVRSRKATTSDCSCILRSGLDVCVELPSKKTDDSDESGQEPVWADARISSIQRKPHDSECSCQFYVNFYVNQGSLGAEIRTLKKEIKVVGINQISILQRLEHFHCEDQHYRWASTEDCSTLPQTRLLVGKFLPDLSWMIVTSVLKKVSFCVRSLENKLVYQVLGSGGVVPPLNTKAHITVVNFKVEENEMVVPFVSEVVYTSNTETNDVAHECHEEEALGSYNVEGLRRSKRRHVQPERYLGCDNSSEINVGTIRTRPPYKMGTLGGGEEENKDDDELSLPLARLFRLQQNCPKQSVNSTKKVNKTDGSPEIIVYNRRAKKPEDVKSGDVVKKEHLKPLAIIPHPIQGDPVSIEKQHNLNDKIARSSGHESGEIPSKYHHLINNHKLKRSSINLINFEPHNLPVKSDDAEKGDGFSSRCHYIYGAPKSQKKSPYDMYDMDIGTNKWEGIQSKKGAQDKKYRSAFLRSKNPGEERTYKDRTLNAAAYKELINSYLKNINAKPTNEEPAVTDQWKQFQDTRSVGQTSETEIPHGEDEEETSELNMLWREMEVSLASTYLEEAEASNADDVAEASEKPKLVCDHYYRLDDEIGICCLKCGHVETDIKAITPPFIQHHVWHQEEKQSGGDGPEPKADEDEDFKLVSNLASPDEPISLETDNVWALIPELGKKLHIHQKKAFEFLWKNIAGSMEPALMESKSRKRGGCVISHTPGAGKTFLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIPIPVYLVHGRRTYRVFNQNTTMHFPGMPKPTEDVKHVIDCLEKIQKWHSHPSVLIMGYTSFLTLMREDSKYAHRKYMSKVLRESPGLLVLDEGHNPRSTKSRLRKVLMKVHTELRILLSGTLFQNNFCEYFNTLCLARPKFPQEVLKALDPKYKRKKKGKEKALESRARKFFLENIAKKIDSNVGEERLQGLNMLRNLTNGFIDNYEAGGSDGLPGLQIYTLLMNSTDMQHDILSRLHKKMAKCNGYPLELELLITLGSIHPWLVKTAVCANKFFTMAELMELDKCKFDLKIGSKVRFVLSLIYRVVQKEKVLIFCHNIAPVKLFLEYFEKYFKWQRGREVLVLTGELELFERGRVMDKFEEPGGASKILLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLVTGSLEEDKYRRTTWKEWVSSMIFSEEFVEDPSQWQAEKIEDDILREMVAEDKSKSFHMIMKNEKASTQMKAS* 1311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2097 1310 Pfam SNF2-related domain 732 995 IPR000330 GO:0005524|GO:0140658
Aev07g2097 1310 Gene3D - 707 995 IPR038718 -
Aev07g2097 1310 MobiDBLite consensus disorder prediction 562 587 - -
Aev07g2097 1310 CDD DEXHc_ATRX-like 729 1003 - -
Aev07g2097 1310 Gene3D - 1081 1302 IPR027417 -
Aev07g2097 1310 MobiDBLite consensus disorder prediction 562 599 - -
Aev07g2097 1310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 713 956 IPR027417 -
Aev07g2097 1310 SMART ultradead3 725 958 IPR014001 -
Aev07g2097 1310 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1113 1273 IPR001650 -
Aev07g2097 1310 CDD SF2_C_SNF 1101 1237 - -
Aev07g2097 1310 Pfam Helicase conserved C-terminal domain 1109 1225 IPR001650 -
Aev07g2097 1310 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 21 1305 - -
Aev07g2097 1310 SMART helicmild6 1141 1226 IPR001650 -
Aev07g2097 1310 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 754 954 IPR014001 -
Aev07g2097 1310 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 21 1305 IPR044567 GO:0080188
Aev07g2097 1310 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1027 1287 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2097 Aev-Chr7 22048102 22054886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2097 1105 1244 RAD5 or RAD16-like Gene Family AT5G43530 34.266 5.04e-12 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev07g2097 SNF2_N 1e-16 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2097 K10875 - gmx:100811703 1834.69