Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2068 ATGGGCCTATCAAGTCTTCCATCACCATCTGAAGGAGTACTTTGTGCAATTTTTGTTAACACTGTTTTGTCAATTTCAATATTCAAAGGCATTGTTAGGACAATCCTACACATTGTTGGTATCCACCTCTCATGCCCTTCCTCATCATCACCACCATCATCGGCTTTGCCGAACGCCTCCCAAAACTCGCCAACCGAGCCATTGGAGTTCCTTCTCAGTAGTAGCCCTAGCAGCCCCACTGAGTGCCTAATTGAGGAGTTCAGAAGCCGGACTCCAGTGCTCCGGTTCGACAGTGTCTGTTCCTATGATGACCCTGAGCATGATTGCTGTGTTTGCCTCACTGAATTCGAGCCGGAATCCGAGGTTAACCGCTTGTCATGTGGCCATCTCTTCCACAAAGTGTGCTTGGAGAAGTGGCTGGATTATTGGAACCTCACATGCCCACTTTGCAGAACTTCATTGATGCCTGAAGAAGATGATCCTTGGTCTCTAGTAACCAATGAGGATGATGATCCTTGGTCACTAGTAACCAATGAGTACTAA 543 0.4715 MGLSSLPSPSEGVLCAIFVNTVLSISIFKGIVRTILHIVGIHLSCPSSSSPPSSALPNASQNSPTEPLEFLLSSSPSSPTECLIEEFRSRTPVLRFDSVCSYDDPEHDCCVCLTEFEPESEVNRLSCGHLFHKVCLEKWLDYWNLTCPLCRTSLMPEEDDPWSLVTNEDDDPWSLVTNEY* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2068 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 157 IPR013083 -
Aev07g2068 180 SMART ring_2 109 150 IPR001841 -
Aev07g2068 180 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Aev07g2068 180 PANTHER - 1 159 IPR044249 -
Aev07g2068 180 SUPERFAMILY RING/U-box 104 157 - -
Aev07g2068 180 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 159 - -
Aev07g2068 180 Pfam Ring finger domain 108 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2068 Aev-Chr7 21829716 21830258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2068 1 160 C3H Transcription Factor Family AT2G04240 55.901 6.14e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2068 K16285 - gmx:100786803 224.557