Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2055 ATGGATGATTCAAAGAGGAGGGTAACATTTAGGAATAGAAAAAATGGCTTGATCAAGAAGGTTGAAGAGATTAGCACCCTTTGTGGGATCGAGGCTTGTGCTATCGTCTATGATTCGAATGATGAGCCTCGGCCGGAGGTTTGGCCATCCCCTTCAGAAGCTAAAACGGTGATCTCCAAGTTCAAGGAACTACCTGAACTTGAACAAAGCAAGAAGATGATGAATCAAGAGGCCTACTTAAAGGAAAGAATTAAGAAGGTCCAAGAACAACTGAAAAAACAAATGAATGACAACATAAAAAATCAGAATAACCTTCTTATGTTGCATTGTCTTAGCGGTGGCATAGTCCTTGATCGTCTCAGCATGGTCGATCTCAATGATCTCTCGAAGACGATTGATGAAAACCTTAAGGAAATCAATCAAAAGATCAATATTATTCAAGGACGAGAGGAGATTACAAATGGAGAAACAATCATCAATGAAGAGCAAGCACAAGAGGCAATTATCCAAACCCAACATTTGGCCATGGACAATATCATCAATGGTTATTGGTCTGCCCCATTTAATCCTTGA 573 0.3979 MDDSKRRVTFRNRKNGLIKKVEEISTLCGIEACAIVYDSNDEPRPEVWPSPSEAKTVISKFKELPELEQSKKMMNQEAYLKERIKKVQEQLKKQMNDNIKNQNNLLMLHCLSGGIVLDRLSMVDLNDLSKTIDENLKEINQKINIIQGREEITNGETIINEEQAQEAIIQTQHLAMDNIINGYWSAPFNP* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2055 190 Gene3D - 2 107 IPR036879 GO:0003677|GO:0046983
Aev07g2055 190 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL80 2 167 - -
Aev07g2055 190 SUPERFAMILY SRF-like 2 86 IPR036879 GO:0003677|GO:0046983
Aev07g2055 190 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 2 43 IPR002100 GO:0003677|GO:0046983
Aev07g2055 190 PANTHER SERUM RESPONSE FACTOR HOMOLOG 2 167 - -
Aev07g2055 190 Coils Coil 77 105 - -
Aev07g2055 190 SMART madsneu2 1 50 IPR002100 GO:0003677|GO:0046983
Aev07g2055 190 ProSiteProfiles MADS-box domain profile. 1 42 IPR002100 GO:0003677|GO:0046983
Aev07g2055 190 CDD MADS_SRF_like 1 75 IPR033897 GO:0000981|GO:0000987|GO:0045944
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2055 Aev-Chr7 21688418 21688990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2055 2 180 Type I MADS-box Gene Family AT5G48670 42.458 3.57e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aev07g2055 SRF-TF 3.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2055 - - aip:107644294 187.578