Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev07g2040 | ATGCGACAGAGCCTTCCGGATTACGTAAAATTCAAGGATGATGCCAAGGTACTATTTCCACCATTTGTTTCAAAGTACATTAGTTTCGTAACCAAAAAGGCCAACGACAAGTGCAAACGTGAACACAGAAAGACTTTGAAATCAGAGGACTTGTTTTGGGCATTGGAGAATCTTGGCTTTAGTGACTATGTTGGGCCTCTTCATAGTTACCTTAATCGCCATTGTCGTACTAAAGACAACGTCCCCATAAGTAATGGACCTAGGCCTAATCATGGGCCTAGACCTATTCCTAGCACTGAGTTTGTTTCTAATTCTAGGTCTGGACCTGTTATTGGGCCTACACCTCAACCTCTTAATGGGATGGTACCTGAGCCTATTCTTAGGATGCTTCAATCAACCTTGTCCACACCACCACTACCACTTTCTTCTAGTCAAGGCTTTTCCATGAACTCAGAAGGAAATTTGAACATGGTTGATACACCAATTAGCTTAAATGAGTTCTTAGGAAATGAGTCAAATAATGATGGTTTCTCACACAATGATATAGTAGATTTTGATCCTTCTATTTTCCTCAACCTTGATTTTGATAACATGTGA | 597 | 0.402 | MRQSLPDYVKFKDDAKVLFPPFVSKYISFVTKKANDKCKREHRKTLKSEDLFWALENLGFSDYVGPLHSYLNRHCRTKDNVPISNGPRPNHGPRPIPSTEFVSNSRSGPVIGPTPQPLNGMVPEPILRMLQSTLSTPPLPLSSSQGFSMNSEGNLNMVDTPISLNEFLGNESNNDGFSHNDIVDFDPSIFLNLDFDNM* | 199 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev07g2040 | 198 | SUPERFAMILY | Histone-fold | 1 | 77 | IPR009072 | GO:0046982 | |
Aev07g2040 | 198 | Gene3D | Histone, subunit A | 1 | 87 | IPR009072 | GO:0046982 | |
Aev07g2040 | 198 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 1 | 55 | IPR003958 | - | |
Aev07g2040 | 198 | MobiDBLite | consensus disorder prediction | 80 | 118 | - | - | |
Aev07g2040 | 198 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9 | 1 | 86 | - | - | |
Aev07g2040 | 198 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 1 | 86 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Aev07g2040 | 198 | MobiDBLite | consensus disorder prediction | 97 | 112 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev07g2040 | Aev-Chr7 | 21548524 | 21549120 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev07g2040 | 1 | 74 | CCAAT-HAP3 Transcription Factor Family | AT1G21970 | 51.351 | 1.12e-23 | 92.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YB | Aev07g2040 | CBFD_NFYB_HMF | 2.5e-11 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev07g2040 | - | K21751 | pda:120105178 | 93.2041 |