Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2040 ATGCGACAGAGCCTTCCGGATTACGTAAAATTCAAGGATGATGCCAAGGTACTATTTCCACCATTTGTTTCAAAGTACATTAGTTTCGTAACCAAAAAGGCCAACGACAAGTGCAAACGTGAACACAGAAAGACTTTGAAATCAGAGGACTTGTTTTGGGCATTGGAGAATCTTGGCTTTAGTGACTATGTTGGGCCTCTTCATAGTTACCTTAATCGCCATTGTCGTACTAAAGACAACGTCCCCATAAGTAATGGACCTAGGCCTAATCATGGGCCTAGACCTATTCCTAGCACTGAGTTTGTTTCTAATTCTAGGTCTGGACCTGTTATTGGGCCTACACCTCAACCTCTTAATGGGATGGTACCTGAGCCTATTCTTAGGATGCTTCAATCAACCTTGTCCACACCACCACTACCACTTTCTTCTAGTCAAGGCTTTTCCATGAACTCAGAAGGAAATTTGAACATGGTTGATACACCAATTAGCTTAAATGAGTTCTTAGGAAATGAGTCAAATAATGATGGTTTCTCACACAATGATATAGTAGATTTTGATCCTTCTATTTTCCTCAACCTTGATTTTGATAACATGTGA 597 0.402 MRQSLPDYVKFKDDAKVLFPPFVSKYISFVTKKANDKCKREHRKTLKSEDLFWALENLGFSDYVGPLHSYLNRHCRTKDNVPISNGPRPNHGPRPIPSTEFVSNSRSGPVIGPTPQPLNGMVPEPILRMLQSTLSTPPLPLSSSQGFSMNSEGNLNMVDTPISLNEFLGNESNNDGFSHNDIVDFDPSIFLNLDFDNM* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2040 198 SUPERFAMILY Histone-fold 1 77 IPR009072 GO:0046982
Aev07g2040 198 Gene3D Histone, subunit A 1 87 IPR009072 GO:0046982
Aev07g2040 198 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 55 IPR003958 -
Aev07g2040 198 MobiDBLite consensus disorder prediction 80 118 - -
Aev07g2040 198 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-9 1 86 - -
Aev07g2040 198 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 86 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev07g2040 198 MobiDBLite consensus disorder prediction 97 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2040 Aev-Chr7 21548524 21549120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2040 1 74 CCAAT-HAP3 Transcription Factor Family AT1G21970 51.351 1.12e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev07g2040 CBFD_NFYB_HMF 2.5e-11 CL0012