Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2034 ATGGATTCTTTAGATGCCACAAATTCTTCTAATTCATCGTCATCATCATCATCATCTTCTGGAGGTGTGAATAGCGGTAATAGTAATAGTAGTAACCGTAATGATAACAATACTAGCAGTAATGGTAATAGTAATGGTGGTACTGTGGCATGGTATGGAATGAGGTTACCATCTGTTACCCCCTTGCGTTCCCCACTTTCCTTTTTGTTGGATTACTCTGGCATTCTGCGCCCACCCCATGATTCTGAGGCTGTGATTGTCAACAATGGAGTTTCCGGTTCGGAATTACTGTCTGAGGCTCGAGTTCGGTCGCTTGATGGTGCTGGTGCTGGTGCTGGTGCTTCTTCTGGGGACCCCTGTGCTGGGGAGGTTGCAATAAGGATCATTGGAGCAGGAGAGCATGACCACAATGTGGGGGTAGGTTCTTCTCCCTCGTCATCGTCGAGGAATCCGGTTGGAGGAGTGGGGTATGATGATTGTGATGAGATGGGTGGTGATAGAGGTCCTGGAGTGACTGCATTGGATGATGATGGTGAGGGCCACGGTGGAATTGCGGCAGGCGAGAGGGTTCCTCTGGTGCATTCGCCTTCGTCTTCGGCTGGTAGTGGACAGACTGATAATGGTGATGCTGGGAATGGAATAGAAAGTAACGGTAGGGATTCGTCGTCCTACCAGAGGTATGATATTCAGCAGATTGCAAGGTGGATTGAGCAGATTCTTCCTTTTTCGCTCCTGTTGTTGGTTGTTTTCATCCGTCAGCATTTGCAAGGTTTCTTTGTCACAATTTGGATATCAGCTGTGATGTTTAAGTCAAATGAAATTGTTAAGAAGCAGACAGCTTTAAAGGGAGATAGGAAAGTCTCAATTCTTGTTGGTATCTCTTCTGCCTTCGTGCTTCATGTGATGTTCATTTATTGGTGGTATCGAAATGATGATCTTTTATACCCCCTGGTCTTAATTCCTCCAAGAGCAACTCCTTTCTGGCATGCAATATTCATCATTTTGGTGAATGATACATTGGTGAGGCAGGCAGCAATGGCCTTCAAGTGTTTTCTGTTAATATATTACAAAAATGGCAGAGGTCATAACTTCCGTCGGCAGGCTCAAATGTTAACTCTTGTTGAGTACACGCTGCTGCTGTATCGTGCCTTGTTGCCAACACCTGTTTGGTATCGGTTCTTCCTAAACAGGGCTTATGGCAGTCTGTTTTCATCATTGACCACAGGATTGTATTTAACTTTCAAGCTGACATCTGTGGTTGAGAAGGTCCAATGCTTCATTTCTGCCTTGAAAGCATTATCCAAGAAGGAAGTTCATTATGGGGTTAATGCCACGATGGAACAGGTTAATGCTGCTGGTGACTTATGCGCTATATGCCAGGAGAAAATGCATGCCCCCATATTGTTGCGATGTAAACACATCTTCTGTGAGGAATGTGTGTCAGAATGGTTTGAGAGAGAAAGGACTTGCCCTCTCTGCAGAGCATTGGTAAAACCTGCCGATCTGCGGACCTTCGGGGACGGTTCAACAAGCCTCTTTTTCCAGCTGTTCTAA 1554 0.455 MDSLDATNSSNSSSSSSSSSGGVNSGNSNSSNRNDNNTSSNGNSNGGTVAWYGMRLPSVTPLRSPLSFLLDYSGILRPPHDSEAVIVNNGVSGSELLSEARVRSLDGAGAGAGASSGDPCAGEVAIRIIGAGEHDHNVGVGSSPSSSSRNPVGGVGYDDCDEMGGDRGPGVTALDDDGEGHGGIAAGERVPLVHSPSSSAGSGQTDNGDAGNGIESNGRDSSSYQRYDIQQIARWIEQILPFSLLLLVVFIRQHLQGFFVTIWISAVMFKSNEIVKKQTALKGDRKVSILVGISSAFVLHVMFIYWWYRNDDLLYPLVLIPPRATPFWHAIFIILVNDTLVRQAAMAFKCFLLIYYKNGRGHNFRRQAQMLTLVEYTLLLYRALLPTPVWYRFFLNRAYGSLFSSLTTGLYLTFKLTSVVEKVQCFISALKALSKKEVHYGVNATMEQVNAAGDLCAICQEKMHAPILLRCKHIFCEECVSEWFERERTCPLCRALVKPADLRTFGDGSTSLFFQLF* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2034 517 SUPERFAMILY RING/U-box 447 499 - -
Aev07g2034 517 MobiDBLite consensus disorder prediction 195 221 - -
Aev07g2034 517 Pfam Zinc finger, C3HC4 type (RING finger) 454 497 - -
Aev07g2034 517 ProSiteProfiles Zinc finger RING-type profile. 456 494 IPR001841 -
Aev07g2034 517 MobiDBLite consensus disorder prediction 138 221 - -
Aev07g2034 517 CDD RING-HC_RNFT1_like 455 494 - -
Aev07g2034 517 ProSitePatterns Zinc finger RING-type signature. 471 480 IPR017907 -
Aev07g2034 517 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 25 517 - -
Aev07g2034 517 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 25 517 IPR044235 GO:0061630|GO:1904294
Aev07g2034 517 SMART ring_2 456 493 IPR001841 -
Aev07g2034 517 MobiDBLite consensus disorder prediction 1 44 - -
Aev07g2034 517 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 430 504 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2034 Aev-Chr7 21488062 21493766 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2034 62 517 C3H Transcription Factor Family AT5G01960 60.430 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2034 - K22379 gmx:100784614 602.053