LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev07g2029	ATGGTGTCTTCTCAATTCTCTACTTTATATGGGAATAGTCCAAAGAAGCCATTCCAAAAAAAGTTGATTCTTCCAAATGGACCAACTGATTATTCGCCTTCTGAATACTTGGACTTTGAGTTTTCTGATGTTTTTGGTCCAACTCCTGTTGAAGCCTCAATAGCAGTGAGCTCTGAAAAGGCTTATGATGATCCTTCTGTCATTCACATTCGCTCCCATTCTCTGCTTGCCCCTTCGCCGTTTATCGACGAGTCCTTGGCGCTTAGCAAGATCACATTACATGAGACAGGTGATGCATTGGAGCTAGTGGAGGACACTTTACAATTGAATGATTGTTGTCTGAATCATAAGGCTGTTGGAGTTGAGGATTTTGTAGTTTTGAAGGTTGTTGGACAAGGAGCTTTTGGTAAGGTGTACCAAGTAAGAAGGGATGGTACTTCAGAAATATATGCTATGAAAGTCATGCGCAAGGATAAGATTATGCAGAGAAATCATGTTGACTATGTAAAATCTGAAAGGGATATACTAACAAAGGTGGAACACCCTTTTATTGTGCGGCTACGGTACTCATTCCAAACAAAATATAGGTTGTACCTTGTGCTTGATTTTGTCAATGGTGGTCATCTTTTCTTTCAGCTCTATCGCCAAGGCCTATTCAGGGAGGATTTGGCTCGTTTCTATGCCGCGGAGATTACTAGTGCCGTTTCTCATCTTCATGCAAATGGTATAATGCACAGGGATCTCAAACCTGAAAATATTCTTCTCGATGCAGACGGTCATGTAGTGTTAACGGATTTTGGCCTAGCGAAGCAATTTGATGAGTCTGCAAGATCGAATTCTATGTGTGGAACTTTAGAGTACATGGCCCCTGAAATTGTTATGGGGAAAGGTCATGATAAGGCAGCTGATTGGTGGAGTGTGGGAATATTAATATACGAAATGCTTACGGGGAAGCCTCCTTTTGCTGGTGGAAATAGACAGAAGATCCAACAGAAGATTATAAAAGAAAAAATCAAGCTCCCAGCATTTTTGTCGAGCGAGGCTCATTCGCTGTTAAAAGGGCTGTTGCAGAAAGATGCTAGCAAACGCCTCGGCAGTGGGCCGACTGGCAGCGAGGAGATAAAAAGCCACAAGTGGTTTAGGTCAGTGAACTGGAAGCTACTCGAATGCCGCGAAATTAGGCCAAGCTTTGTCCCAGAAGTTGCTGGGAAGCATTGTGTTGCTAACTTTGAGGAGAAATGGACTAACATGTCTTTGCTGGATTCTCCAGCATCTAGTCCCAAAACAGATGACAAGATCTTCAAGAGATTCTCCTATGTTGGTTCTCCCATGTAA	1335	0.4262	MVSSQFSTLYGNSPKKPFQKKLILPNGPTDYSPSEYLDFEFSDVFGPTPVEASIAVSSEKAYDDPSVIHIRSHSLLAPSPFIDESLALSKITLHETGDALELVEDTLQLNDCCLNHKAVGVEDFVVLKVVGQGAFGKVYQVRRDGTSEIYAMKVMRKDKIMQRNHVDYVKSERDILTKVEHPFIVRLRYSFQTKYRLYLVLDFVNGGHLFFQLYRQGLFREDLARFYAAEITSAVSHLHANGIMHRDLKPENILLDADGHVVLTDFGLAKQFDESARSNSMCGTLEYMAPEIVMGKGHDKAADWWSVGILIYEMLTGKPPFAGGNRQKIQQKIIKEKIKLPAFLSSEAHSLLKGLLQKDASKRLGSGPTGSEEIKSHKWFRSVNWKLLECREIRPSFVPEVAGKHCVANFEEKWTNMSLLDSPASSPKTDDKIFKRFSYVGSPM*	445

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev07g2029	444	SMART	pkinase_C_6	381	441	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Aev07g2029	444	SUPERFAMILY	Protein kinase-like (PK-like)	117	425	IPR011009	-
	Aev07g2029	444	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	243	255	IPR008271	GO:0004672\|GO:0006468
	Aev07g2029	444	ProSiteProfiles	Protein kinase domain profile.	124	380	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev07g2029	444	Pfam	Protein kinase domain	125	380	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev07g2029	444	CDD	STKc_AGC	130	380	IPR045270	GO:0004674\|GO:0005524
	Aev07g2029	444	PANTHER	RIBOSOMAL PROTEIN S6 KINASE	1	441	-	-
	Aev07g2029	444	Gene3D	Transferase(Phosphotransferase) domain 1	204	399	-	-
	Aev07g2029	444	ProSiteProfiles	AGC-kinase C-terminal domain profile.	381	444	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Aev07g2029	444	ProSitePatterns	Protein kinases ATP-binding region signature.	130	153	IPR017441	GO:0005524
	Aev07g2029	444	SMART	serkin_6	124	380	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev07g2029	444	PANTHER	SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19	1	441	-	-
	Aev07g2029	444	Gene3D	Phosphorylase Kinase; domain 1	122	422	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev07g2029	Aev-Chr7	21455735	21458254	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev07g2029	1	443	AGC Kinase Gene Family	AT3G08720	65.152	0.0	615

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC-Pl	Aev07g2029		Pkinase	3.3e-77	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev07g2029	K04688		-	gmx:100803509	680.633