Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2024 ATGGGTAGGAAAAAAAGTAAACCACATAGATCAGGTGGGATAATACTAGATGCAAATGCTACTGCTGAAGCAGAATTGGATAAACAGAATGTTGTAGGAGGAGGTGAAGAAAGAAAGGGTGATTCTGGGGAAGTTGATATACCCTATTTCGTTGAAGTTGACCGGTCTGGTTGGCATTCAAGCGAGCACCTTGATATTTCTGAAGTTGTTCTGAGGGATTTGAATTTAGGAGAAGGTGGTTCTGGTTTTGAACTGTCTGATGATTTTTATCGGGATCCCCAGTACTCGTTAAGATTTCGGGTGTGTAATGTCAGTAATGTTCTTGGTCGAATCAAATTAGGCCACTGGCCTGTGTTACCCTATACTGATATTCATCTAGAGTTTGTGAAAAGAGTTGCAGTGGACAATGTGGAAACATGTACAATGTTGTTGTCTGGGAATTTTGATGGACCTGATGAAGGTGTTTCGGGTCTTGTTCACTTGGCAAGTTTGAAGTTTTTTACGTTGAGGCCAGTTCTTGGGATTAGGCTTTCGGAAGACATTCATTCCCTTAGGTTGAGGGTTGAGATACTGAAGAGTTCATTCGATGCATGCGAGTCACTTCTTGATGTTTCTAGGCAACTATGGAAAAGAAGTATGATGAATGTCATGTCTTGGCTACGCCCAGAGATGATGACTTCAGAAGTTAGATATGGATTTAGTAGTTGTGTAAAAACGGAAGTTGATTCGCAGACAGAGATGGGACATGAGACATCCTACACCCGAAAATATTCAAGGTTTGATCCTGCTGGGTTTTATGAAGCCATTAAGCCTTCAAAATCTGAGTCAATGCTAGAAGACGACATACCTGAGTTACTTCCAGAGCTGAGGCCATATCAGCGGCGTGCAGCTTTCTGGATGGTACAACGGGAGAAACAAATAGAAGCAAGTCAGGGTGAAAGAGAAAGAATTCAGTTCCACTCTCCACTATGTGTGCCTGTGGATTTTCTGGATACAAATTCTAAAATGTTTTTCAATCCATTCAGTGGAAATATTTCATCGTGCTCGGAGACTTCTTCACCTTATATATTTGGAGGAATTCTTGCTGATGAGATGGGCTTGGGAAAAACTGTCGAACTGCTTGCTTGTATCTCTGCTCACCGTAGATCGGGATCTGGAAGTGATATACTAATTGATCCAGTTCCTCAAGTTAATGGGGACCAAAAGGTCACTTTAAAAAGACTCAAAAGAGAGCGTGTGGAGTGCATATGTGGAGCTGTGAGTGAAAGTATCAAATATCAAGGGCTATGGGTTCAATGTGACATTTGTGATGCTTGGCAGCATGCAGATTGTGTTGGTTATTCAGCTAAAGGGAAATCACTGAAATCAAAACATGGAAGTGAAACCAGAACGTATAAAACCACCATAGCTGTGAGGGATGGTGAATATGTATGTCAGATGTGCTCTGAACTAATACAAGCTACTGAATCTCCTATCGCATCTGGTGCCACTCTTATTGTCTGCCCTGCTCCTATTTTGCCCCAGTGGCATGATGAAATTATACGCCATACATGCTCAGGCTCCTTGAAAACTTGTATTTATGAAGGCGTGCGAGAAACATCTTTCTCCAATACATCTCTAGCGGATATCGGTGAACTTGCCAGTGCTGACATTGTGATAACTACCTATGATGTGCTTAAAGAGGATTTGTCCCATGATTTTGATAGACATGAAGGTGATCGACACGTTTTGAGATTTCAGAAAAGGTACCCAGTTATCCCTACTCTTCTTACTAGGATATACTGGTGGAGAGTTTGCTTGGATGAGGCTCAAATGGTGGAAAGTAATGCTGCCGCTGCCACTGAAATGGCTCTAAGACTCCATTCAAAGCATCGGTGGTGCATTACAGGGACACCAATTCAGCGCAAGCTTGATGATTTATATGGGCTTCTAAGATTCCTTAAAGCTAGTCCTTACGATACACACAAGTGGTGGACTGAAGTTATTCGAGATCCTTATGAGAAGGGAGATATGGGAGCCATGGAATTTACACACAGAGTTTTCAAACAAATCATGTGGCGTTCTTCTAAAGAACATGTAGCAGATGAATTGGACCTTCCCTCGCAGGAGGAGTGCCTCTCATGGCTTACTCTCTCACCCGTAGAAGAACACTTTTACCAAAGGCAACATGAAACCTGTGTCAATGATGCCCATGAAGTTATTGAAAGTTTGAGAAATGATATTCTTAATAGAAGAGGCCCAGATTCCGCATCTTTGAATGGTTTATCAGATCCTTTAATCACTCACTCAGAGGCAGGTAAGCTACTCAATGCTCTACTGAAGCTTCGCCAGGCTTGTTGTCACCCACAGGTTGGGAGTTCTGGGCTGCGATCCCTGCAGCAGTCACCAATGACCATGGAGGAAATACTAATGGTTCTTATAAGTAAGACTAAAGTAGAAGGTGAGGAAGCTCTCAGAAGGTTAGTTGTTGCTCTGAATGGGCTTGCAGCAATAGGTATAATACAGAAAGATTTTTCTCAAGCTGCTTTACTGTACAATGAAGCTATGACATTGGCTGAAGAGCACTCTGAAGATTTCCGCTTGGATCCTTTGTTAAATATCCACATTCATCATAATCTTGCCGAAATAATCCCTCAGGCTGCAGACCTTGCTCTAAGATTGCCATCTAGAGGAAAGCAGTTCTCTCGAGCTTCTGCAGTTAAGACAGCCAGAAAGCACTTCATTGACACGGTTGATCAGCGTCTTTTAAAGAGGCAAAAAATAAGCAGCTGTGATGACACACAATTTACAGTGGGTTCTGCAGAACCATCAGATGCCACCTCCAGCCTATCAGAAAATAACTTAAATGAGGACCAGGATACTGATGATATATCAGCATGTTCTGTCAAATACCTGATGGAAGAATGTGAAGATTTAAAGCAGAAATACTTAACTGTGTTCAGTTCAAAGTTATCTGCAGCACAACAGGAGTTTCAAAATTCATATATGCAGGTTTGTAAGGGATTTAGTGACAGCAGAGCAGATAAAAGTACATTTTGGTGGTTAGAAGCACTTCATCATGCAGAACAGAACAAGGATTTCTCAACTGAGTTGACTAAGAAGATTGAAGAAGCCATCACAGGAACTTCAAATAGTTCAAAGTCGTCAAAAATAGCTGCTCGTTTCCGGAGCATGATATCTCTGCAGTTTCAAATTCAGACAGCTTTGGATCAGCTGGAGACCTCTCGGAAAATGCTACTAGATCGACTGCTAGAAATTGACAAGACAATGGAAAAACCAAATGAAGAAGATATTGAACGTGTGGGCAAATGTCGAAATTGTCAACCTAATTGTGATGGTCCCCCATGTGTTTTGTGTGAACTAGATGAACTTTTCAAGGATTATGAAGCTAGACTCTTTGTTCTTAAGAATGAACGTGGTGGAATAATTTCATCTGCTGAGGAGGCATTAGATTTTCAGAAGAAGAATTTTGCATTGAATCATTTCCTCTCAAAGATATCACAATCTAATCAGAGATCAAAAGTATCTGAAAATGATAATGAAGAAACAAAGAAAAGGAATGTTGGACAAAGAGTTGTGGCTTCAAGATCAGCATCTGAGTTGGAAACTATTCTTGGAGTCATAAAGAACTGTTGCAAGGCTCGATTAGGAAGGGACGTTTTCTCAGAAGCTACCAAGCATTTACATACTTTTGAGGGAATGAGGAAGGAGTTTGGCCATGCAAGGTCTTTGGCTTTGGCTCAAGCTCAGTATCTACGCGCCCATGATGAAATAAAGATGGCTATTTCTCGTTTGCACTTAAGGGCAAATGAGGATGACAAGTCCCTTGATGCTTTAGGTGAAGACGAATTATTTGCTGCTAGCTCAAATTTCTCCCATGATAAGTTTATGTCGTTGACCTTGTTGTCACAGATAAAAGGAAAACTACGCTACTTAAAGGGTTTGGTACAATCGAAGCAAAAATTGACATCAGGAAGTCCAGATAATTCTTCATTCGCTCAAGAGATAACTGCAATGTCAAACTCCGCAGAACAGAGGACCGCAGACATATTTAAAGCTGGTGATGAAACATGCCCAGTCTGCCAAGATAAGCTTGGCAATCAGAAAATGGTATTTCAATGTGGGCATGTTACATGCTGTAAATGTTTGTTTGCTATGACTGAGGAAAGACTTCAACATAGCAAGACTCATAATTGGGTGATGTGCCCAACATGTCGACAACATACTGATTTTGGAAGCATTGCCTATGCTGTTGATGCACGGAATGAATCTTCTAATTCTTCGATGCTACAAACAGTTGACAACTGTGAAAAATGTGAAGCATCCATTACTGTTAAAGGCTCATATGGAACAAAGATTGAAGCAATCACAAGAAGAATCTTGTGGATAAAGGCCACAGATCAAAAAGCAAAAGTTCTTGTATTTTCAAGTTGGAATGATGTACTTGATGTATTGGAACATGCCTTTGCTATGAATGACATTACCCACATTCGGATGAAAGGCGGCAGGAAAGCACATGTTGGTATCAGTCAATTTAGAGGACAACAGAACGGAAGGAAAGGATCTGAGACGTCAGTATCGAAATCTATTCAGGTGTTATTGCTTTTAATCCAACACGGAGCCAATGGCCTCAATCTTTTGGAAGCACAGCATGTGGTTCTTGTAGAGCCATTACTCAATCCAGCTGCCGAGTCACAAGCAATCAGTCGTGTACATCGTATCGGTCAAAAGAATAAGACCCTCATTCATCGTTTCATTGTCAAAGACACAGTTGAAGAGAGCCTATATAAATTAAACAGAAGCAGGAGCAATCATTCATTCATCAGTGGAAACACCAAAAATCAAGATCAACCTGTTTTGACCCTCAAGGATGTGGAATCCTTGCTGTCAAGAGCCCCATTAACCTTGCCAGAGAGTGATGAAAATCCTCCTAATGCAAATTCAGATCTGCGGATCATGCCGCCATCGATGGCCGCGGCTATGGCTGCTGAGAGAAGACTCAATGAGCAAAGTACATGA 5019 0.4132 MGRKKSKPHRSGGIILDANATAEAELDKQNVVGGGEERKGDSGEVDIPYFVEVDRSGWHSSEHLDISEVVLRDLNLGEGGSGFELSDDFYRDPQYSLRFRVCNVSNVLGRIKLGHWPVLPYTDIHLEFVKRVAVDNVETCTMLLSGNFDGPDEGVSGLVHLASLKFFTLRPVLGIRLSEDIHSLRLRVEILKSSFDACESLLDVSRQLWKRSMMNVMSWLRPEMMTSEVRYGFSSCVKTEVDSQTEMGHETSYTRKYSRFDPAGFYEAIKPSKSESMLEDDIPELLPELRPYQRRAAFWMVQREKQIEASQGERERIQFHSPLCVPVDFLDTNSKMFFNPFSGNISSCSETSSPYIFGGILADEMGLGKTVELLACISAHRRSGSGSDILIDPVPQVNGDQKVTLKRLKRERVECICGAVSESIKYQGLWVQCDICDAWQHADCVGYSAKGKSLKSKHGSETRTYKTTIAVRDGEYVCQMCSELIQATESPIASGATLIVCPAPILPQWHDEIIRHTCSGSLKTCIYEGVRETSFSNTSLADIGELASADIVITTYDVLKEDLSHDFDRHEGDRHVLRFQKRYPVIPTLLTRIYWWRVCLDEAQMVESNAAAATEMALRLHSKHRWCITGTPIQRKLDDLYGLLRFLKASPYDTHKWWTEVIRDPYEKGDMGAMEFTHRVFKQIMWRSSKEHVADELDLPSQEECLSWLTLSPVEEHFYQRQHETCVNDAHEVIESLRNDILNRRGPDSASLNGLSDPLITHSEAGKLLNALLKLRQACCHPQVGSSGLRSLQQSPMTMEEILMVLISKTKVEGEEALRRLVVALNGLAAIGIIQKDFSQAALLYNEAMTLAEEHSEDFRLDPLLNIHIHHNLAEIIPQAADLALRLPSRGKQFSRASAVKTARKHFIDTVDQRLLKRQKISSCDDTQFTVGSAEPSDATSSLSENNLNEDQDTDDISACSVKYLMEECEDLKQKYLTVFSSKLSAAQQEFQNSYMQVCKGFSDSRADKSTFWWLEALHHAEQNKDFSTELTKKIEEAITGTSNSSKSSKIAARFRSMISLQFQIQTALDQLETSRKMLLDRLLEIDKTMEKPNEEDIERVGKCRNCQPNCDGPPCVLCELDELFKDYEARLFVLKNERGGIISSAEEALDFQKKNFALNHFLSKISQSNQRSKVSENDNEETKKRNVGQRVVASRSASELETILGVIKNCCKARLGRDVFSEATKHLHTFEGMRKEFGHARSLALAQAQYLRAHDEIKMAISRLHLRANEDDKSLDALGEDELFAASSNFSHDKFMSLTLLSQIKGKLRYLKGLVQSKQKLTSGSPDNSSFAQEITAMSNSAEQRTADIFKAGDETCPVCQDKLGNQKMVFQCGHVTCCKCLFAMTEERLQHSKTHNWVMCPTCRQHTDFGSIAYAVDARNESSNSSMLQTVDNCEKCEASITVKGSYGTKIEAITRRILWIKATDQKAKVLVFSSWNDVLDVLEHAFAMNDITHIRMKGGRKAHVGISQFRGQQNGRKGSETSVSKSIQVLLLLIQHGANGLNLLEAQHVVLVEPLLNPAAESQAISRVHRIGQKNKTLIHRFIVKDTVEESLYKLNRSRSNHSFISGNTKNQDQPVLTLKDVESLLSRAPLTLPESDENPPNANSDLRIMPPSMAAAMAAERRLNEQST* 1673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2024 1672 SUPERFAMILY FYVE/PHD zinc finger 411 483 IPR011011 -
Aev07g2024 1672 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1455 1626 IPR001650 -
Aev07g2024 1672 ProSiteProfiles Zinc finger RING-type profile. 1358 1406 IPR001841 -
Aev07g2024 1672 SUPERFAMILY RING/U-box 1346 1410 - -
Aev07g2024 1672 MobiDBLite consensus disorder prediction 928 948 - -
Aev07g2024 1672 Pfam Helicase conserved C-terminal domain 1452 1575 IPR001650 -
Aev07g2024 1672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 594 1629 IPR027417 -
Aev07g2024 1672 SMART helicmild6 1483 1575 IPR001650 -
Aev07g2024 1672 SMART ring_2 1358 1405 IPR001841 -
Aev07g2024 1672 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1352 1419 IPR013083 -
Aev07g2024 1672 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER 1 1645 - -
Aev07g2024 1672 MobiDBLite consensus disorder prediction 1632 1651 - -
Aev07g2024 1672 Pfam SNF2-related domain 292 784 IPR000330 GO:0005524|GO:0140658
Aev07g2024 1672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 268 686 IPR027417 -
Aev07g2024 1672 SMART PHD_3 414 482 IPR001965 -
Aev07g2024 1672 ProSitePatterns Zinc finger PHD-type signature. 415 481 IPR019786 -
Aev07g2024 1672 SMART ultradead3 285 661 IPR014001 -
Aev07g2024 1672 Gene3D - 344 395 IPR038718 -
Aev07g2024 1672 Gene3D - 1420 1653 IPR027417 -
Aev07g2024 1672 MobiDBLite consensus disorder prediction 928 952 - -
Aev07g2024 1672 CDD DEXQc_SHPRH 289 688 - -
Aev07g2024 1672 CDD SF2_C_SNF 1449 1586 - -
Aev07g2024 1672 Gene3D - 482 709 IPR038718 -
Aev07g2024 1672 CDD PHD_TCF19_like 416 481 - -
Aev07g2024 1672 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 401 481 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2024 Aev-Chr7 21410269 21425219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2024 489 782 RAD5 or RAD16-like Gene Family AT5G22750 31.438 5.91e-35 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev07g2024 SNF2_N 3e-88 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2024 K15710 - gmx:100776659 2745.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2024 07 21410269 21425219 Aev07g2024 07 21410269 21425219 ECH