Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2015 ATGGGTAAGAAAAACAAATTGAAGGAACATCATCATGGTGGCAAAGAATATTGCCCCTTGACTCTTTTCGTCTCCAACTTGCCCTATTCCTTTACCACCTCTCAGCTTGAGGAGACCTTCAGTGAAATTGGACCTGTCAGGCGTTGCTTCCTGGTCACACAAAAGGGGTCAACCCAACATCGTGGTTTCGGCTATGTTCAATTTGCTGTTGAGGAAGATGCCAACCGTGCTATTGAACTGAAGAATGATTCATCTGTTGGAGGCCGCAAAATAGCTGTGAAGCATGCAATGCCGCGTCCTTCTCGTGAAGATCGACAGTCAAAACCAAATCAAGTTGGTAAGACAGAAGACCTTACGAAGTCAAAAAATGATGATAAAGGAAGCAAATATTCCGGAGAAGAGAAACCTGTTTCAATTTTGAAGGAAGAAGAAGTACAAGTTTCAAATAATAAAAGAAACTCAAGGAATCCTGTGGAAATGAGAAAAGCAACTCTTTGTAGTGATATAGCAGATGATGGTGGCGGCTCGGAAAAGCAGAGGGTTGCTAGAACTGTGATATTTGGTGGTCTCATAAATTCAGATATGGCTGAAGATGTTCACAGCCAAGCCAAAGATATTGGCACTGTGTGTTCTGTCAAGTACCCCCTTCCCAAGAAAGATCTTGAACTGCATGGTCTCCTGCAAGATGGCTGTACTTTGGATGCTTCAGCTGTACTCTATACAAGTGTAAAGTCGGCTCGAGCTGCTGTTTCAACATTACATAAAAAAGAGATTGGAGGGGGAACTGTTTGGGCACGCCAACTGGGTGGAGAGGGATCCAAGACTCAGAAATGGAAGCTTATTGTTAGAAACCTTCCCTTCAAGGCCAGAGAAAATGAAATAAGAGATATGTTTTCATCTGCAGGGTATGTGTGGGATGTATTTATTCCACCCAAGCCTGATACAGGTCTATCCAAGGGTTTTGCATTTGTAAAATTCACCTCCAAGCAAGATGCAGAAAATGTATGGAATGTTACTGAGATTTTTATTTGTGTACTATTTGTGTTCTTGACGGCTCGTGCTGTTGATTGGGCTGTGCCAAAAAAAATATTTAAAAATGATGCAAATGATACTCTTGCCTCAGAAAAAGCTGGTGATGATAGTGCTCCTGAGGACGATGTTGAGCTTGCTAGTGATGATCAACCTAGTCATGGAGATGATAGTGTTGACTCTAGTTCCATGGAGGAAGAAGGTGTTCCTTCTGAAGTTAATTTTGATGAAGAAGCAGACATTGCAAGAAAGGTTCTTAACAATTTAATGACATCTTCCACCAAAGGAACGTCACTGGATAATGATTCTACTTTGTCCGAAGAAAACGAGGAGCCAAAATCAAATGAAATTGTTAATGATGCTGATAATAAAGCATCTAATGAATCAGAAAAAGATTCAGGTGTTTCTAAACCTGAACTTTCCAGCAAAAGCAAGTTATCAAATCCTAAGCAAACAGAAGATGTTGATTTGCAGCGAACAGTTTTCATAAGTAATCTTCCTTTTGAATGTGATAAGGAAGAAGTGACGCAACGGTTTTCTGCATTTGGGGAAGTAGAATCCTTTGTTCCAGTTCTCCACCTAGTGACCAACCGACCAAGAGGAACTGGTTTTCTTAAGTTTAAAACCACAGAAGCAGCTGATGTTGCAATTTCAACAGCTAGTGCTGCTTCGAGCTTGGGTATTTTACTTAAAGGTAGACCATTAAAAGTTTTAAAGGCTTTGGATAAGAAATCAGCTCATGACAAGGCACTAGAGAAGGAAAAAAATGAGGTTCATGACCATCGGAATCTTTACTTGGCTAAGGAGGGACTCATTCTTGAGGGAACTCCAGCTGCTGAAGGGGTTTCAGCTGGTGATATGTTAAAACGCCAAGGGTTGGAAAGGAAAAAGAAGACAAAGCTCCAATCACCAAATTTTCATGTTTCAAGAACTAGACTTATTATCTACAACATACCAAAGTCAATGTCTGAAAAAGAACTCAAGAAGCTTTGCATTGATGCAGTCATCTCTAGAGCTACCAAGCAAAAACCTGTACTTCGGCAGATAAAATTCTTGAAAGATGTTAAGAAAGGAAAGGTTGTTCCGGAGCGCCATTCACGTGGAGTTGCCTTTGTCGAATTTTCAGAGCATCAGCATGCCCTTGTGGCTCTTAGAGTTCTCAACAATAATCCTGAAACTTTTGGTCCTGAACATCGGCCAATTGTGGAGTTTGCTCTTGACAATGTTCAAACGCTGAAACTTCGCAAGGCGAAGATACAATCTCAGAGGCAGGCTTCTCGTGGTGATGATGATAATGCTAATGCACCGAGAAAAACAGAAGTTGACACGCATGCAAAGGACAGAAAGCGAAAATCTCGAGAGGATGGCAAACCAATGAATGATGCGTGGACCGATGGTGAATCAGGTTTGGGTGTTACAGTGGCAAATGGAAAATCTCCAGAAGGGCGCAAGTCCAAAAGACAGAAAGGAAATCATAAGGGTAGAAAGGGTGAAGAGTTATCACAGAAAGAAAATTCAGATGCCTTGTCCTCCTCAAAGCGAAAGAACAAACAAGATGGCCGGAGCCGTGGTGGCGCACCAGTTGAAGGTCAAAACACTGCCATTGACACCAAGAAAGGAAAATCAGGAAACAAAGCAGATGATGGATCTAAGAAAAGGAAGGTGCAAAACCAAGAACAAGAAGACCAAAAGGTGTCTAAGAAACGGCCTAAAAAGAAGAAAGAACAAGCAGGGAAAGATGTAGTAGATAAGCTTGACATGCTTATAGAACAATATAAATCCAAGTTCTCACACAAAGGTAATGATGGTGACAAAAAACCTTCCAAACAGCTTAGGAAATGGTTTGAATCATAG 2883 0.4121 MGKKNKLKEHHHGGKEYCPLTLFVSNLPYSFTTSQLEETFSEIGPVRRCFLVTQKGSTQHRGFGYVQFAVEEDANRAIELKNDSSVGGRKIAVKHAMPRPSREDRQSKPNQVGKTEDLTKSKNDDKGSKYSGEEKPVSILKEEEVQVSNNKRNSRNPVEMRKATLCSDIADDGGGSEKQRVARTVIFGGLINSDMAEDVHSQAKDIGTVCSVKYPLPKKDLELHGLLQDGCTLDASAVLYTSVKSARAAVSTLHKKEIGGGTVWARQLGGEGSKTQKWKLIVRNLPFKARENEIRDMFSSAGYVWDVFIPPKPDTGLSKGFAFVKFTSKQDAENVWNVTEIFICVLFVFLTARAVDWAVPKKIFKNDANDTLASEKAGDDSAPEDDVELASDDQPSHGDDSVDSSSMEEEGVPSEVNFDEEADIARKVLNNLMTSSTKGTSLDNDSTLSEENEEPKSNEIVNDADNKASNESEKDSGVSKPELSSKSKLSNPKQTEDVDLQRTVFISNLPFECDKEEVTQRFSAFGEVESFVPVLHLVTNRPRGTGFLKFKTTEAADVAISTASAASSLGILLKGRPLKVLKALDKKSAHDKALEKEKNEVHDHRNLYLAKEGLILEGTPAAEGVSAGDMLKRQGLERKKKTKLQSPNFHVSRTRLIIYNIPKSMSEKELKKLCIDAVISRATKQKPVLRQIKFLKDVKKGKVVPERHSRGVAFVEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNVQTLKLRKAKIQSQRQASRGDDDNANAPRKTEVDTHAKDRKRKSREDGKPMNDAWTDGESGLGVTVANGKSPEGRKSKRQKGNHKGRKGEELSQKENSDALSSSKRKNKQDGRSRGGAPVEGQNTAIDTKKGKSGNKADDGSKKRKVQNQEQEDQKVSKKRPKKKKEQAGKDVVDKLDMLIEQYKSKFSHKGNDGDKKPSKQLRKWFES* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2015 960 CDD RRM4_RBM28_like 654 751 - -
Aev07g2015 960 MobiDBLite consensus disorder prediction 435 496 - -
Aev07g2015 960 MobiDBLite consensus disorder prediction 835 865 - -
Aev07g2015 960 SUPERFAMILY RNA-binding domain, RBD 21 264 IPR035979 GO:0003676
Aev07g2015 960 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 502 585 IPR000504 GO:0003723
Aev07g2015 960 MobiDBLite consensus disorder prediction 96 149 - -
Aev07g2015 960 MobiDBLite consensus disorder prediction 482 496 - -
Aev07g2015 960 CDD RRM1_RBM28_like 21 99 - -
Aev07g2015 960 CDD RRM3_RBM28_like 502 583 - -
Aev07g2015 960 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 278 370 IPR000504 GO:0003723
Aev07g2015 960 PANTHER RNA-BINDING MOTIF PROTEIN, Y CHROMOSOME, FAMILY 1 MEMBER C-RELATED 17 393 - -
Aev07g2015 960 PANTHER RNA-BINDING MOTIF PROTEIN, Y CHROMOSOME, FAMILY 1 MEMBER C-RELATED 501 766 - -
Aev07g2015 960 MobiDBLite consensus disorder prediction 449 481 - -
Aev07g2015 960 MobiDBLite consensus disorder prediction 89 159 - -
Aev07g2015 960 SUPERFAMILY RNA-binding domain, RBD 274 336 IPR035979 GO:0003676
Aev07g2015 960 Gene3D - 264 340 IPR012677 -
Aev07g2015 960 Gene3D - 434 599 IPR012677 -
Aev07g2015 960 Gene3D - 2 111 IPR012677 -
Aev07g2015 960 MobiDBLite consensus disorder prediction 765 804 - -
Aev07g2015 960 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 504 562 IPR000504 GO:0003723
Aev07g2015 960 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 22 91 IPR000504 GO:0003723
Aev07g2015 960 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 280 334 IPR000504 GO:0003723
Aev07g2015 960 PANTHER RNA BINDING PROTEIN 17 393 - -
Aev07g2015 960 PANTHER RNA BINDING PROTEIN 501 766 - -
Aev07g2015 960 MobiDBLite consensus disorder prediction 883 911 - -
Aev07g2015 960 MobiDBLite consensus disorder prediction 390 404 - -
Aev07g2015 960 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 654 762 IPR000504 GO:0003723
Aev07g2015 960 Gene3D - 653 748 IPR012677 -
Aev07g2015 960 MobiDBLite consensus disorder prediction 373 420 - -
Aev07g2015 960 MobiDBLite consensus disorder prediction 918 960 - -
Aev07g2015 960 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 20 98 IPR000504 GO:0003723
Aev07g2015 960 MobiDBLite consensus disorder prediction 760 960 - -
Aev07g2015 960 SUPERFAMILY RNA-binding domain, RBD 502 731 IPR035979 GO:0003676
Aev07g2015 960 SMART rrm1_1 655 746 IPR000504 GO:0003723
Aev07g2015 960 SMART rrm1_1 279 349 IPR000504 GO:0003723
Aev07g2015 960 SMART rrm1_1 503 581 IPR000504 GO:0003723
Aev07g2015 960 SMART rrm1_1 21 94 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2015 Aev-Chr7 21309517 21317804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2015 22 102 Eukaryotic Initiation Factors Gene Family AT2G36660 34.568 6.73e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2015 K14573 - gmx:100794821 1315.83