Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2005 ATGGAGCTATATGATCATGATTTCTTGGAGGAGCTATTTTCTCTAAGAAGAGAAACATGTTCTGAAGAAGAAAATCATCACCACAATAATCTCTTCTCTTCTTCTTCTTCTAATAATAATGGTTGGAGTAGTAATAGTTTTGATTCTTCTTTTGATCAAAACTCTCCTCATTATTCTTCTCTTGTTCAAAACTCCTCCTATAATTGCCAACAAGTCCCTCAAATTAACCACAATTACAATAATGACCATCACTACACCTTCAATGAAATCTATTGTTCCTTACTTGAAGAATTCTCTGCCCCACAAATAATTGACCACTCATCAACCCCACCATCATCATTCTTGGCTCAAGAAGATAATAATTATTATTATTGTGATCCATTTTCTATGAATTTGGAAGAAGAGGATAATCCTTCAGGTTTGTTTGGGGAAGAAGAGCTTCAAAATACTACTAGTGTGTGCAAAGTGGAACAGAGTCAATCCCCTGAAGATTTGGTGCCAATTTTCAATAGTAATACTAATTCTACAATTTGTATGGAACGAAAGAACAGAGCAAAGAAGATGATGATTCAGGGGCAACCCTCAAAGAATCTAATGGCTGAGAGAAGAAGAAGAAAGAGATTGAATGATAGGCTCTCTATGCTAAGATCTATTGTCCCCAAGATAAGTAAGATGGACAGAACATCCATACTTGGGGACACAATTGATTACATGAAGGAACTCCTAGAGAAGATCAATAGTTTGAAACAAGAAATAGAAGTGGATTCAAATGGCATTTTCAATGATGTAAAGCCAAATGAAATGTTAGTGAGAAATTCTCCCAAGTTTGATGTGGAGAGAAGAAATGGCAACACAAGGGTTGAGATATGCTGTGGAGCAAAACCAGGGCTATTGCTATCTACAGTCAACACTTTGGAAGCATTAGGCCTTGAGATTCAACAATGTGTTATTAGTTGTTTCAATGATTTCACAATGCAAGCTTCTTGTTCAGAGGAATTGGAGCATAAGACAATTCTGAGTCCTGAAGATATAAAACAAGCACTATTTAGAAGCGCAGGATATGGAGGAAGATGTTTGTGA 1080 0.362 MELYDHDFLEELFSLRRETCSEEENHHHNNLFSSSSSNNNGWSSNSFDSSFDQNSPHYSSLVQNSSYNCQQVPQINHNYNNDHHYTFNEIYCSLLEEFSAPQIIDHSSTPPSSFLAQEDNNYYYCDPFSMNLEEEDNPSGLFGEEELQNTTSVCKVEQSQSPEDLVPIFNSNTNSTICMERKNRAKKMMIQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLEKINSLKQEIEVDSNGIFNDVKPNEMLVRNSPKFDVERRNGNTRVEICCGAKPGLLLSTVNTLEALGLEIQQCVISCFNDFTMQASCSEELEHKTILSPEDIKQALFRSAGYGGRCL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2005 359 Coils Coil 238 258 - -
Aev07g2005 359 Pfam Helix-loop-helix DNA-binding domain 198 241 IPR011598 GO:0046983
Aev07g2005 359 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 359 - -
Aev07g2005 359 SMART finulus 198 247 IPR011598 GO:0046983
Aev07g2005 359 CDD ACT_UUR-ACR-like 285 326 - -
Aev07g2005 359 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 192 241 IPR011598 GO:0046983
Aev07g2005 359 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 255 IPR036638 GO:0046983
Aev07g2005 359 Gene3D - 179 256 IPR036638 GO:0046983
Aev07g2005 359 PANTHER DNA BINDING PROTEIN 3 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2005 Aev-Chr7 21244909 21247268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2005 156 359 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 58.257 2.31e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev07g2005 HLH 7.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2005 - - gmx:100814388 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2005 07 21244909 21247268 Aev07g2005 07 21244909 21247268 ECH