Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1995 ATGGGAAGAGGAAAGATCGTGATAAGGCGAATCGACAATTCGACGAGTAGGCAAGTGACGTTCTCGAAACGAAGAAATGGTTTGCTGAAGAAGGCGAAGGAGCTTGCGATCTTGTGCGATGCTGAGGTTGGAGTCATGATCTTCTCCAGCACTGGTAAACTCTACGATTTCTCTAGTACAAGCATGAGATCAGTTATCGATAGATACAACAAAGCAAAAGAAGAAAATAATCTTGGGAGTTCAGCCTCTGAAGTTAAGTTTTGGCAAAGGGAGGTGGCAATGTTACGACAACAATTGCTAGATTTGCAAGAAAGCCATCGGCAAATTATGGGGGAAGAACTATCAGGTTTGACAGTCAAAGAACTACAGAGTTTGGAGAACCAACTGGAGATTAGCCTCCGTGGTGTCCTTACAAAAAAGGACCAAGTTTTAATGGATGAAATACAGGAACTAAATCGGAAGGGGAACCTCATACACCAAGAAAATGTGGACCTGTATGAGAAGGTAAACCTAATTCGTCAAGAAAACATGGAATTAAAAACAAAGGTATATGGAACAAAAGATGATAATGGAACAAACAGAAATTCGGTTCTTGCAAATGGTCTAGGCATACAAGAGGATTTGCAGGTGCCTGTGAGTCTCCAGCTAAGCCAGCCACAGCCACAACAGTATGATGCATCACCAAGAGCAACAGAACTAGGCAGATTGCAACTTCAATGA 720 0.4222 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVMIFSSTGKLYDFSSTSMRSVIDRYNKAKEENNLGSSASEVKFWQREVAMLRQQLLDLQESHRQIMGEELSGLTVKELQSLENQLEISLRGVLTKKDQVLMDEIQELNRKGNLIHQENVDLYEKVNLIRQENMELKTKVYGTKDDNGTNRNSVLANGLGIQEDLQVPVSLQLSQPQPQQYDASPRATELGRLQLQ* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1995 239 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aev07g1995 239 Coils Coil 85 105 - -
Aev07g1995 239 CDD MADS_MEF2_like 2 74 IPR033896 GO:0000977|GO:0045944
Aev07g1995 239 SUPERFAMILY SRF-like 2 82 IPR036879 GO:0003677|GO:0046983
Aev07g1995 239 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Aev07g1995 239 Pfam K-box region 82 169 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev07g1995 239 Gene3D - 13 94 IPR036879 GO:0003677|GO:0046983
Aev07g1995 239 MobiDBLite consensus disorder prediction 217 239 - -
Aev07g1995 239 PANTHER MADS-BOX TRANSCRIPTION FACTOR 23 ISOFORM X1 1 237 - -
Aev07g1995 239 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Aev07g1995 239 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Aev07g1995 239 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev07g1995 239 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev07g1995 239 ProSiteProfiles K-box domain profile. 85 175 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aev07g1995 239 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 237 - -
Aev07g1995 239 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1995 Aev-Chr7 21111441 21123470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1995 1 232 MADS-box Gene Family AT4G37940 60.944 9.96e-93 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Aev07g1995 K-box 1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1995 K09264 - gmx:100812413 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1995 07 21111441 21123470 Aev07g1995 07 21111441 21123470 ECH