Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1993 ATGTCATCACAAGCAGTGCAATTGCGTGTCGAACACAGCCAAGTGATCATGGACAATGGCATAGTACAAGTGTATTTATCGAATCCTGGTGGATTTGTCACAAAAATACAATATAATGGGATTGATAATCTGCTTGAAGCTCAAAATGAAAATGGCAACAGAGGGTATTGGGATGTTGTTTGGAGTAAAGAAGGAAGTACAGGAACAACCGGAATATTTGAGCGGATTGAAGGAACAAAATTTAATGTTGTAGTGGAAAATGAAGAACAGGTGGAAATCTCGTTTACAAGAATGTGGGATCCATCTATGGAGGGAAAGCTTTCGCCTCTGAATATTGACAAAAGATATGTGATGCTGCGAAATTCCTCAGGCTTCTATTGTTACGGCATCTTTGAACACCTAAAGGAGTGGCCTGCATTCAACATACCTCAAATCAGAATCGTTTTCAAGCTTCGAAAAGATAAGTTTCATTATATGGCGGTGGCTGATAATAGACAAAGATTCATGCCTCTGCCAGATGACCGATTACCTGGAAGAGGAGAAGAACTCGTTCCTCCAGAAGCAGTTCTGTTGGTCAATCCTGTGGAACCAGAGTTCAAGGGAGAGGTGGATGACAAGTACGAATACTCATGTGAAAACAAAGATCTTAAGGTCCATGGGTGGATAAGCTCTGAATCTGAAACTGAATCACCCACCGGGTTCTGGGTCATCTTTCCCAGCAATGAGTTCCGATCAGGTGGCCTTCTCAAACAGAATCTTACTTCACATGTTGGCCCCATCAGCCTCGCGATGTTTCTTAGTGCTCATTACGCAGGAGAGGATATTGTTCTGAAACTGCAGCCAAATGAGCCATGGAAGAAAGTCTTTGGGCCAACTTTTATCTATCTTAACACTTTGTTGGATATTGACGACCCACTTGTGCTATGGGAAGATGCCAAATATCAGATGATAGAGGAAGTACAAAATTGGCCCTATGATTTTCCAGCTTCAGAGGATTTTCACAAGCCAAGCCAACGAGGTAGCGTGTGTGGCACGTTACTAATTAGAGACAGGTGCCAAAGTGATGATTACATAGTAGCAAGTGGTGCATATGTAGGAGTAGCACCACCAGGAGACGCTGGATCCTGGCAAAGGGAATGCAAGGGATACCAATTCTGGAGTATAGCAAACGAGGAAGGCTATTTCTCAATTGACAATATATGCAGTGGGGATTACAATCTAAATGCATGGGTTCCAGGTTTCATTGGAGAGTATTGGAGCAATGTTGTTATCACCATAACTCCAGGTTGTGATACAAACTTGGGTAACATTATTTTTGAGCCCCCAAGAGATGGTCCAACACTATGGGAAATAGGGATTCCTGATCGCTCTGCTGCTGAGTTCTATATTCCTGATCCTAATCCAAAGTACATTAATAAACTTTATGTCCACCATCCAGATAAGTTTAGGCAATATGGCCTATGGGAAAGATATGCAGAGTTGTACCCAAATGAAGATTTGATCTTCACAGTTGGTGTCAGTGACTACACAAAAGATTGGTTCTTCGTACAAGTCACCAGGAAGAAAGATGATGACACTTACCAAGGAACTACATGGCAAATCAAATTCAATCTTGATCATGTGGAGTCAAGTGGAATATATAAGCTGCGAATTGCTCTTGCAAATGCAAATGTCTCTGAATTACAGGTTAGAGTGAATGATGTAAAAGAAGAGGCTCCACTATTTACTAGTGGGGTGATTGGGAAGGACAATGCTATAGCTAGACATGGAATTCATGGACTCTATTGGCTATTCAGCATTGATGTGCCATGTCTTCAGCTATTGGAAGGAGAAAATACTATATACTTAACTCAAGCTTTGGCTTCAGGTCCATTGGCCCTTTTCCAGGGGATAATGTATGACTATATTCGTTTGGAAAGCCCCAACCCTATTCTTATTTGA 1941 0.4168 MSSQAVQLRVEHSQVIMDNGIVQVYLSNPGGFVTKIQYNGIDNLLEAQNENGNRGYWDVVWSKEGSTGTTGIFERIEGTKFNVVVENEEQVEISFTRMWDPSMEGKLSPLNIDKRYVMLRNSSGFYCYGIFEHLKEWPAFNIPQIRIVFKLRKDKFHYMAVADNRQRFMPLPDDRLPGRGEELVPPEAVLLVNPVEPEFKGEVDDKYEYSCENKDLKVHGWISSESETESPTGFWVIFPSNEFRSGGLLKQNLTSHVGPISLAMFLSAHYAGEDIVLKLQPNEPWKKVFGPTFIYLNTLLDIDDPLVLWEDAKYQMIEEVQNWPYDFPASEDFHKPSQRGSVCGTLLIRDRCQSDDYIVASGAYVGVAPPGDAGSWQRECKGYQFWSIANEEGYFSIDNICSGDYNLNAWVPGFIGEYWSNVVITITPGCDTNLGNIIFEPPRDGPTLWEIGIPDRSAAEFYIPDPNPKYINKLYVHHPDKFRQYGLWERYAELYPNEDLIFTVGVSDYTKDWFFVQVTRKKDDDTYQGTTWQIKFNLDHVESSGIYKLRIALANANVSELQVRVNDVKEEAPLFTSGVIGKDNAIARHGIHGLYWLFSIDVPCLQLLEGENTIYLTQALASGPLALFQGIMYDYIRLESPNPILI* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1993 646 Gene3D - 445 639 - -
Aev07g1993 646 CDD RGL4_C 449 639 - -
Aev07g1993 646 Gene3D - 5 278 IPR014718 GO:0030246
Aev07g1993 646 SUPERFAMILY Galactose-binding domain-like 444 639 IPR008979 -
Aev07g1993 646 Pfam Polysaccharide lyase family 4, domain III 447 638 IPR029411 -
Aev07g1993 646 Pfam Polysaccharide lyase family 4, domain II 361 434 IPR029413 -
Aev07g1993 646 CDD RGL4_N 8 298 - -
Aev07g1993 646 SUPERFAMILY Starch-binding domain-like 337 435 IPR013784 GO:0030246
Aev07g1993 646 PANTHER LG27/30-LIKE GENE 1 642 - -
Aev07g1993 646 Pfam Rhamnogalacturonate lyase family 4 203 IPR010325 -
Aev07g1993 646 CDD RGL4_M 338 437 IPR029413 -
Aev07g1993 646 Coils Coil 551 571 - -
Aev07g1993 646 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1993 Aev-Chr7 21072962 21086004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1993 1 642 Polysaccharide Lyase AT1G09890 63.297 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1993 K18195 - gmx:100815677 1132.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1993 07 21072962 21086004 Aev07g1993 07 21072962 21086004 ECH