Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1974 ATGGGTGGTGCAACTTCGTTCAAGCCAATATTCAACATCACATTCTCGTTCTTCCTCATCACCATCACCACCACCATAACCATAATTGGCCCTTTCATCATCGTCGAGGCCGATGATGATTCAAGAGAAACCCCTCCAATCCCCACCCTCGAAGACAACAATGGTGACGATGTCGCCGACGCACCACAACCACCGTCGGATGCCTCGACGAGAAACTCTGGCCACTTCGGAGGACGACCAGAGCCTTTCAAGTCGAGCACGACGATAGTAGTTGGCGCTTTAGCAATCATGTTCTCTCTTACATTATTCCTCCTTCTCTACATCAAATATTGCAATGGTGGGGACATTTACATCGGTGGCGACAATGGAGAAATAACGCAACAACCAGATGCGAGGAGGAACTCCGGCATCGACCCCGCCGTCGTGGAGCAGTTGCCCATCTTCCGATTCAGATCGTTGAGAGGACAAAAGGAAGGTTTAGATTGTGCAGTTTGCCTTATGAGGTTCGAGGATCCTGAGGTTCTTCGATTGCTGCCCAAATGCAAGCACGCATTCCATGTGGATTGCGTCGACATGTGGCTTGACCAACATTCCACGTGCCCTCTTTGTCGGTATAAGGTGGATCCCGAAGACATCGAAACTCGGCAAAAAGAGAAAGAATCAGAGGAAGAAGAAGGAGAAGAAGAACAACCGTTTGACATTGAAAGCGGCACGAGGCGTGTGTCGGGGAGGCACTCATCCGTAACTGGAGAAAAGGATGGTGGGCCATTGGAGATTGTTTTGAATAATGAACACAAAACTTTAATGATGTCGTCTTCTAGGAGCAAATCTTTAGACACTAATACTTCCATAATAACAACCTCTAGAGGAGGCTTTGTGTGTCCCTTAAAGCTAGAGAACAACAATTATAAGAATGACAATTTGCAGCAGCATAGGTTGGAACGTCGTATTTTTATAGATCCCCCTTATTCCTCTTCTTCTGTTAATTCTAACGGTAGTAACAGTGGGTCTGATCTACTGTACATAACGTCTGAGATGATCATCCATGACGCTGTTGTTTCGCAACCACGGAGACGACGTAACAGCGTTCAGGGCCCACCATCCCAATTAGGCACAGGAGGAGCAAGAAGGACTGTTTCAGAGATAGCGGGGTTGGGGAGGTTCTTGAGTGTTGGGAGAAGTAGGAACGGAGGGAGGGAAGGCCAACGCAACAATAGGGAAGAGAGAGAGAGACGACATCATGAAGGAGTGGTTACTAGGTGGTCAGCTTGGATTTCAAGGTTGCACAAGCCATGGGGTGATCGGTAG 1308 0.4801 MGGATSFKPIFNITFSFFLITITTTITIIGPFIIVEADDDSRETPPIPTLEDNNGDDVADAPQPPSDASTRNSGHFGGRPEPFKSSTTIVVGALAIMFSLTLFLLLYIKYCNGGDIYIGGDNGEITQQPDARRNSGIDPAVVEQLPIFRFRSLRGQKEGLDCAVCLMRFEDPEVLRLLPKCKHAFHVDCVDMWLDQHSTCPLCRYKVDPEDIETRQKEKESEEEEGEEEQPFDIESGTRRVSGRHSSVTGEKDGGPLEIVLNNEHKTLMMSSSRSKSLDTNTSIITTSRGGFVCPLKLENNNYKNDNLQQHRLERRIFIDPPYSSSSVNSNGSNSGSDLLYITSEMIIHDAVVSQPRRRRNSVQGPPSQLGTGGARRTVSEIAGLGRFLSVGRSRNGGREGQRNNREERERRHHEGVVTRWSAWISRLHKPWGDR* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1974 435 ProSiteProfiles Zinc finger RING-type profile. 162 204 IPR001841 -
Aev07g1974 435 Pfam Ring finger domain 161 204 IPR001841 -
Aev07g1974 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 212 IPR013083 -
Aev07g1974 435 MobiDBLite consensus disorder prediction 357 375 - -
Aev07g1974 435 SMART ring_2 162 203 IPR001841 -
Aev07g1974 435 PANTHER RING-H2 FINGER PROTEIN ATL43 62 427 - -
Aev07g1974 435 SUPERFAMILY RING/U-box 142 209 - -
Aev07g1974 435 MobiDBLite consensus disorder prediction 40 80 - -
Aev07g1974 435 MobiDBLite consensus disorder prediction 399 415 - -
Aev07g1974 435 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 62 427 - -
Aev07g1974 435 MobiDBLite consensus disorder prediction 353 377 - -
Aev07g1974 435 CDD RING-H2_PA-TM-RING 161 204 - -
Aev07g1974 435 MobiDBLite consensus disorder prediction 214 258 - -
Aev07g1974 435 MobiDBLite consensus disorder prediction 390 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1974 Aev-Chr7 20902883 20904190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1974 88 427 C3H Transcription Factor Family AT5G05810 37.333 1.87e-49 171