Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1968 ATGCTTCCTTTTGGGAGATTCTATGGGTTCGAGAGTTGGCTACACCATCATCATCACGACTCTTCATCATCATCAGGGTATGTTCCGATGATCAAGGCTTCGGATTTGAACGGTGGGAGATCAAAGGGGGAGAGGAAATCAACGGAAGCATGCAAGAGCCACAGGGAAGCTGAGAGGAGACGCAGGCAGCGAATCAACGCCCACCTCTCTACCCTACGCTCTCTCCTCCCTAACACCGCCAAGTCAGATAAGGCATCGTTGCTAGCTGAGGTGGTTCAGCACGTGAAGCGGCTCAGGAAGCAAGCCGATGACGTGGCGCGAGACTCATCGCGCGAACCCGGTTCGGTTCGATCCGAAGCACAAACCGAACCGTGGCCGTTTCCGGGTGAATCAGACGAAGCGACGGTGAGCTATTGCGAAGGAGGAGAGGGTAGTGGTGAACCGAAGCGTATGAAGGCAACGCTGTGCTGCGAAGACAGGCCCGGTCTGAACCTGGAACTGAACCATGCAATACGGTCGGTCCGGGCGAAGGCGGTTCGGGCCGAGATGATGACGGTTGGGGGCCGAACCAAGAGCGTTGTGGTGATGCAATGGCCTAATGGTGATGATTCGAACGTGGAGGTTGGTGCGCTGGAACGGGCTTTGAAGGCAGTGGTAGATAATCGGGCTTTGGTGGGCTCTGGGGTGGGCCGTGTCGTGTTGGGCCATAAGCGGGCCCGAGATAATTATGACTCTTTCGATGAGTTCAATTGCTCCTTTTGA 762 0.5564 MLPFGRFYGFESWLHHHHHDSSSSSGYVPMIKASDLNGGRSKGERKSTEACKSHREAERRRRQRINAHLSTLRSLLPNTAKSDKASLLAEVVQHVKRLRKQADDVARDSSREPGSVRSEAQTEPWPFPGESDEATVSYCEGGEGSGEPKRMKATLCCEDRPGLNLELNHAIRSVRAKAVRAEMMTVGGRTKSVVVMQWPNGDDSNVEVGALERALKAVVDNRALVGSGVGRVVLGHKRARDNYDSFDEFNCSF* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1968 253 PANTHER OS09G0463900 PROTEIN 31 240 - -
Aev07g1968 253 SMART finulus 55 104 IPR011598 GO:0046983
Aev07g1968 253 Gene3D - 43 107 IPR036638 GO:0046983
Aev07g1968 253 PANTHER TRANSCRIPTION FACTOR BHLH30 31 240 IPR045847 GO:0003700|GO:0006355
Aev07g1968 253 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 49 98 IPR011598 GO:0046983
Aev07g1968 253 MobiDBLite consensus disorder prediction 38 61 - -
Aev07g1968 253 MobiDBLite consensus disorder prediction 100 114 - -
Aev07g1968 253 MobiDBLite consensus disorder prediction 19 61 - -
Aev07g1968 253 Pfam Helix-loop-helix DNA-binding domain 51 98 IPR011598 GO:0046983
Aev07g1968 253 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 108 IPR036638 GO:0046983
Aev07g1968 253 MobiDBLite consensus disorder prediction 100 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1968 Aev-Chr7 20848906 20850646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1968 2 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 40.254 1.22e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev07g1968 HLH 1.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1968 - - aip:107608273 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1968 07 20848906 20850646 Aev07g1968 07 20848906 20850646 ECH