Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1964 ATGTTCTCCAAGTTTCATCAACAACCACCTTTCCCACTCTCCCGAGAATGCCAAACATCCGAAGACGATGATAGCGCTGGGCCCACTCCCGCCTCGGCCCAACAAAAGCCCACATCCACTGACGGCGCCACCATCGAGGTCGTCAGGCGGCCCAGAGGCCGCCCACCAGGATCCAAAAACAAGCCCAAACCGCCGCTAATTATAGCCCGCGAGCCCGGGCCCGCCATGAGCCCGTACATTCTTGAAATACCTGGCGGAAGCGACGTAATTGAATCCATAGCGCGTTTCACACGCAGAAAGAATACGGGTTTGTGCGTTCTATCAGGTTCCGGAACCGTCGCTAATATCACTCTCCGTCAATCTTCCGCCTTTCCCGGCGCCATCGTCACGTTCCACGGCCGATTCGACATACTCTCGATCTCCGCCACGGTCGTTCCCCACGCGCCGCCACCGGCGGTTCCGAGCGGGTTCTCGATCTCACTCTCCGGACCTCAGGGCCAGATCGTCGGAGGACTCGTCTCCGGGAGGCTCCTAGCGGCGGGGACAGTGTTCGTGATCGCTGCGTCGTTCAATAACCCGTCGTACCATAGGCTGCAGTCGTCGGCAGAGGAGGAGGATGCGAGGAACAGCTCCGTCGGCGGCGGAGAGGTGCAGACGCCGCCGGTTTCGGGTGCGCCTTCGGAGAGCGGGGGACACGTGGCGGTTGGGGAGTCGTGTGGGATTGGTATGTACAGCTGTCAGCTTCCCTCTGATGTGATTTGGGCTCCAACGGCAAGACCACCGCCGTTTTGA 792 0.6048 MFSKFHQQPPFPLSRECQTSEDDDSAGPTPASAQQKPTSTDGATIEVVRRPRGRPPGSKNKPKPPLIIAREPGPAMSPYILEIPGGSDVIESIARFTRRKNTGLCVLSGSGTVANITLRQSSAFPGAIVTFHGRFDILSISATVVPHAPPPAVPSGFSISLSGPQGQIVGGLVSGRLLAAGTVFVIAASFNNPSYHRLQSSAEEEDARNSSVGGGEVQTPPVSGAPSESGGHVAVGESCGIGMYSCQLPSDVIWAPTARPPPF* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1964 263 Pfam Plants and Prokaryotes Conserved (PCC) domain 78 192 IPR005175 -
Aev07g1964 263 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 15 262 - -
Aev07g1964 263 ProSiteProfiles PPC domain profile profile. 73 213 IPR005175 -
Aev07g1964 263 MobiDBLite consensus disorder prediction 23 42 - -
Aev07g1964 263 SUPERFAMILY AF0104/ALDC/Ptd012-like 75 202 - -
Aev07g1964 263 CDD DUF296 78 190 IPR005175 -
Aev07g1964 263 Gene3D - 77 209 - -
Aev07g1964 263 MobiDBLite consensus disorder prediction 197 231 - -
Aev07g1964 263 PIRSF ESCAROLA 3 255 IPR014476 GO:0003680
Aev07g1964 263 MobiDBLite consensus disorder prediction 1 71 - -
Aev07g1964 263 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 15 262 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1964 Aev-Chr7 20810779 20811570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1964 39 262 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 61.905 5.17e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1964 - - gmx:100811053 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1964 07 20810779 20811570 Aev07g1964 07 20810779 20811570 ECH
Aev07g1964 07 20810779 20811570 Aev08g0680 08 3942826 3950514 PCT