Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1941 ATGGTTGAAATAAAAAGGATATTACATCAATGGAAGCATCCATTTGATGATTATCCTTTTGAGGGATTTTGTTTTGGCTCATGGCAACCTGTGAAGAACATAAAAATTGAGTCAGGAACTATGTCCTTATATTTTAAGGATAACCATTGTATGACAATGGTAAAAGGACCTTCTACAGAAATTCGATTAAGATCACGGAAAGCAACTTCTTCAGATTGTTCTTGCTTTTTACGACCTGGTATTGATATATGTGTTTTGTTAGTGCCTAAATGTGGTGGTGATCCTGATGTATCTTCTCCTCAACCTATTTCCATCCCTCAAAGGCTTCACAACATTGTATCTGAAGATGGTCCATATCGATGGGATTCAACTATAGATAGCTCATCGATAGTCCAAACTAAATTGCTTCTTGGGAAATTCCTAGTTGATATTTCATGGTTCATTGCAACATCTGTTATAAAGAAGGTTTCATTCATTGTAAGATCTATTGAGAACATGATTGTGTATCAAGTTTTGGGAGGCTATGAAACTAACCACGCCTCAACATCTAATGCTTTCTATTTTATAAATGTCATTAACTTCAGAGTAGACCAACACGGTATAGTAAAACCATTTGTTACTCAAGTTGATACATCTAGAATCAAGGAAATTGGCTATAAAAATGATTCTGGTTCCCCTGAAGATGAAGTGCCTCCATATTGTAATGTCCAAGGATTAAGGCGTTCCATGCGATGCCATGTAGAGCCTAAGCACTTCCATGATTATGAAACTTTCAAGTTTAAGAGTGACCTTTCTGTTAGGGCCTGGCCATATAAGGTAAGAGCAAGGAAAGATGATGATGAGCCAGTAGCACTAGCATCAAAGTGTGGCTTCCAAGTGGAGAATTGTCCAAGAGAAGATGTTCCAAACAACAATATCAAAAAGTGGAATTCTCAAAAGGGGACTACCATTCAACCAAAACTAGAATCAGTAAATCAGACTCCACATTCTGTCATTTACCCTTGTGAAGATGAACCCTTTCTGCATATGCAACGTTCTCTCAATAACAAGGGTAACACAAACGAAATTGGGGATGTAGGTGATGAAGAAGAGGTTGGTGAATTTTCTTCAAGGGGCTATCGTGCTTATGGAACCTCTAGGAAGCGTAAGAAGAACCCATCCGGTGTAGATGATATGGACAATGAACCTAGGTGGGAAGGGAGAAACCCCAACAGTGAAGCTAAAGGAAAAAGATATTGGTCAACACCTTCAAGAAGTAGGCATGAAGATGATGAACAAAGGGCTTATAAAGATAGAACCATAAACTCAGCTGTGTACAAGGAAATGATAGATTCATACCTGAAGAATAATAGAATAGCAAACAAGGAAGAACCAAACATAAGAGATCAATGGACTGAAACAAGCAAATGTGAGCAGAAAAATGGAGAAGGAACATCTCAAAAGAAGGAAGATGCAGAAATGTCTGACATAGATAAGTTGTGGAAAGAAATGGACTCATCACTGACATCAATTTATCTTCAAGAGGATGTTGTTCCTGCTGATACCAATCAAATATGTGATCACGACAATAGATTGGATGAAGAGATTGGAATCTACTGTCGTAGATGTGGTGTTGTGGACATCGACATCACGAGTATCACCCCAGACTTTTTGCCACACTTAAGAAGGCGCCATCAAGAAGAGGAGGAGGAGAAAAACAAAGAGGAAGCAGAGAAGAAGAAAAATAATGGAGAACAAGAATCACATAAGCTAAAGGCTAATCACAAACTTGTCAATGATCAAGACTCTACTGGTGCGCCTATACCTCAAGGTTCTGCAATTGAACTTGTACCTCAAGAAAATACTAAAATTTGGGATTTGATTCCGGGGCTAAGAGAAAAGATGCATGTCCACCAGAGGAGAGCCTTTGAATTTCTTTGGCAAAATATTGCAGGGTCCATAGATCCAACACAAATGGAAGCAGAATCCCAACATAGTGGTGGCTGTGTGATATCTCATTGTCCAGGAGCAGGAAAAACTTTCTTGATCATCTCCTTTCTTACAAGCTTCTTGAAGCTATTTCCAGGGAAGAGACCATTGGTGTTAGCTCCAAAAACCACATTGTACACGTGGCATAAGGAGTTTATCAAATGGGAGATTCCGATTCCGGTGTATTTGATTCACGGTCGCAGATCACATAGAGAGTTGAACAAGACATCAGTGTCCATTCCTGGTGTTCCAAAGCCAACAAATGATATAAATCATTCTTTAGATTGTTTAGAAAAGATACAAAAGTGGCGTGATCACCCTAGTGTTCTAATTATGGGATACACTTCTTTTTTTGCAATGATGAGAGATAATTCAAAGTATGATCACAGGAAGTACATGGCCAAAGAGATGAGGGAAAGCCCCGGGTTGCTGATACTCGACGAAGGGCACAATCCAAGGAGTACCAAATCAAAGCTTAGGAAAGTTCTGATGAAAGTAGAGACAGAATATAGAGTGCTACTATCAGGTACATTATTTCAGAACAATTTTTGTGAGTTCTTCAACACATTGTGCTTGGGGAGACCAAAGTTTATCAGAGAAGTGTTGAACTTACTAGACACGAACTACGAGAAGCTCAAGGTAGTAGAGAAAGGTTCGCATTTTGTTGAGGCGCGTGCTCGAAATTTCTTCCTAGACAAAATTGACAAGATAATTAAGTCAAAGAATGAGGAATCTTTCCTGAATGAAGAGAGTATACAAAGTATAAACTTGCTGAAAAAACTCACAAGTGGTTTCATTGATGTTTATGAAGGTGGAAACCATGATACACTCCCAGGTTTGAAAATTTATACTTTGCTGATGAACACAACTGAAGTGCAACAGAGGATTCTGAAAAATCTTCATAAGAAAATGGCTGAGTATACTAGTTACCCTTTGGAGATAGAGCTTCTGATAACACTTGGATCGATACATCCATGGCTAATAACAACAGCAAAATGTGCTTCTAAGTTCTTCTCTTATGGGCAATTAATGGAATTGAACAACTACAGGTATGATTTAAGGATAGGAACAAAAGTCAGATTTGTTATGAGTCTTGTCCATAGAGTTTTCAAGGAGGAGAAAGTTCTCATCTTCTGCCACAACATTGCACCTATGAAGATGCTATTGGAACAATTTGAGATGTGTTTCAAGTGGAAAAAAGACAATGAGATTCTGGTAATAACCGGTGCACTTGATCTCTTTGACAGAGGGAAAGTGATAGATAAGTTTGAAGACCCTTATGGTGCATCAAAGGTGTTAATTGCTTCGATCAAGGCTTGCGCTGAAGGGATTAGTCTCACTGCAGCTTCAAGGGTTATTATGTTGGATACTGAGTGGAACCCATCAAAGACTAAGCAAGCTATTGCAAGGGCTTTTAGGCCAGGTCAACAAAAGATGGTTTATGTGTATCAGTTAATTGCTATGGAGTCAATTGAGGAAGATAAGAATAAGATAACCACTTGGAAAGAGTGGGTTTCGAACATGATTTTCAATGAGGAAGTTGTGGAACCTTCACAATCTCAAGCACAAAACATTGAGGATGAGGTTCTTAGGGTGATGGTTGAGGAGGACAAGTCTAAGATATTCCATAAGATCATGACAATGCACATGGAAAAGCCTACAAAAGCAGCATGA 3642 0.3874 MVEIKRILHQWKHPFDDYPFEGFCFGSWQPVKNIKIESGTMSLYFKDNHCMTMVKGPSTEIRLRSRKATSSDCSCFLRPGIDICVLLVPKCGGDPDVSSPQPISIPQRLHNIVSEDGPYRWDSTIDSSSIVQTKLLLGKFLVDISWFIATSVIKKVSFIVRSIENMIVYQVLGGYETNHASTSNAFYFINVINFRVDQHGIVKPFVTQVDTSRIKEIGYKNDSGSPEDEVPPYCNVQGLRRSMRCHVEPKHFHDYETFKFKSDLSVRAWPYKVRARKDDDEPVALASKCGFQVENCPREDVPNNNIKKWNSQKGTTIQPKLESVNQTPHSVIYPCEDEPFLHMQRSLNNKGNTNEIGDVGDEEEVGEFSSRGYRAYGTSRKRKKNPSGVDDMDNEPRWEGRNPNSEAKGKRYWSTPSRSRHEDDEQRAYKDRTINSAVYKEMIDSYLKNNRIANKEEPNIRDQWTETSKCEQKNGEGTSQKKEDAEMSDIDKLWKEMDSSLTSIYLQEDVVPADTNQICDHDNRLDEEIGIYCRRCGVVDIDITSITPDFLPHLRRRHQEEEEEKNKEEAEKKKNNGEQESHKLKANHKLVNDQDSTGAPIPQGSAIELVPQENTKIWDLIPGLREKMHVHQRRAFEFLWQNIAGSIDPTQMEAESQHSGGCVISHCPGAGKTFLIISFLTSFLKLFPGKRPLVLAPKTTLYTWHKEFIKWEIPIPVYLIHGRRSHRELNKTSVSIPGVPKPTNDINHSLDCLEKIQKWRDHPSVLIMGYTSFFAMMRDNSKYDHRKYMAKEMRESPGLLILDEGHNPRSTKSKLRKVLMKVETEYRVLLSGTLFQNNFCEFFNTLCLGRPKFIREVLNLLDTNYEKLKVVEKGSHFVEARARNFFLDKIDKIIKSKNEESFLNEESIQSINLLKKLTSGFIDVYEGGNHDTLPGLKIYTLLMNTTEVQQRILKNLHKKMAEYTSYPLEIELLITLGSIHPWLITTAKCASKFFSYGQLMELNNYRYDLRIGTKVRFVMSLVHRVFKEEKVLIFCHNIAPMKMLLEQFEMCFKWKKDNEILVITGALDLFDRGKVIDKFEDPYGASKVLIASIKACAEGISLTAASRVIMLDTEWNPSKTKQAIARAFRPGQQKMVYVYQLIAMESIEEDKNKITTWKEWVSNMIFNEEVVEPSQSQAQNIEDEVLRVMVEEDKSKIFHKIMTMHMEKPTKAA* 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1941 1213 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 19 93 IPR044567 GO:0080188
Aev07g1941 1213 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 103 1204 IPR044567 GO:0080188
Aev07g1941 1213 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 653 852 IPR014001 -
Aev07g1941 1213 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1017 1182 IPR001650 -
Aev07g1941 1213 Gene3D - 934 1211 IPR027417 -
Aev07g1941 1213 MobiDBLite consensus disorder prediction 413 429 - -
Aev07g1941 1213 Coils Coil 551 587 - -
Aev07g1941 1213 MobiDBLite consensus disorder prediction 552 585 - -
Aev07g1941 1213 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 19 93 - -
Aev07g1941 1213 MobiDBLite consensus disorder prediction 383 406 - -
Aev07g1941 1213 SMART helicmild6 1046 1131 IPR001650 -
Aev07g1941 1213 SMART ultradead3 624 857 IPR014001 -
Aev07g1941 1213 Pfam Helicase conserved C-terminal domain 1015 1130 IPR001650 -
Aev07g1941 1213 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 103 1204 - -
Aev07g1941 1213 MobiDBLite consensus disorder prediction 457 486 - -
Aev07g1941 1213 Pfam SNF2-related domain 627 846 IPR000330 GO:0005524|GO:0140658
Aev07g1941 1213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 854 IPR027417 -
Aev07g1941 1213 Gene3D - 603 880 IPR038718 -
Aev07g1941 1213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 797 1175 IPR027417 -
Aev07g1941 1213 CDD SF2_C_SNF 1011 1142 - -
Aev07g1941 1213 MobiDBLite consensus disorder prediction 347 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1941 Aev-Chr7 20505585 20510402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1941 1060 1185 RAD5 or RAD16-like Gene Family AT5G05130 37.795 5.11e-14 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev07g1941 SNF2_N 8.6e-17 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1941 K10875 - gmx:100811703 1168.68