Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1919 ATGTTGAGTAGTGAGACACTGGACTTAACCTCCAACAATACTAGTACTACCCACAACACCATAGACACAAATACTAAAACCCCACCACCACCAACCCAACCCACCAACACCCCAAAGTCTCTATCTTTCACCACCGTCACACTCAAGCGCCTCCCTCACCTCCACCCCACAACCACCGCCGCCACCACCAACAACACAATGAATGTAATTTCATACAAGGAATGCCTCAAGAACCATGCCGCAAGCATAGGTGGTCATGCACTTGATGGTTGTGGTGAGTTCATGGCTTCCTCCTCCACCAACCCCACCGACCCTCTCTCTCTCAAGTGCGCCGCCTGCTGCTGCCACCGCAACTTCCACCGTCGTGACCCTCCAGAACCTTCCACAACAACCCCTACAAAAAACAACCCCAATTTTCCCAACTGCTTCTACTCTCCTCCTCCACCACCACCACCACCACCTTCTTCAGCCACCACCACCACCACAACTGCTCCGCCGCCACTTCCGCCTCAACCTCTGCCTCACCGTACCAAAAGGCAGAGCACTAGCCCAAGCCTCAGTTCTAGCCCAAGCCATAGTCCTAGCCCCATTTCAAGCCCTTCTTCACCACCACCACTCTCACATGTTCCACCTTCTTACCACCACCACCACCACCACCATCGCCATTCCTCTGCTCCTCATCACAGGCTTTTTTCACTTGGTAATGCTTACTCTGTTGTTGCATCATTACCATCCTCTGATCATCATCATGAGCTCAACAGAAACAACAATTTCAACAACAACAATAATAGTAAGAAAAGGCACAGGACAAAGTTCAGCCAGGAGCAGAAAGAGAAGATGTACAGATTCTCAGAAAAGTTGGGTTGGAGAATGCAGAAAGGTGATGATGATGGCTCTGTTCAGGAGTTTTGTAATGAAATTGGTGTCCCTAGAGGCGTATTCAAGATTTGGATGCACAACAACAAGAACACCTTCAACAAGATCAAGAGATCAGATGGAATTATTGATGGAGGAAACAACCCCCAAAATAATAATAACATTGATGATCATCATCACAAAATCAATGATAATAATGAGGATGGTGGAGGAATTGATCACCATGATGATAATAACAGTGATGAGATTCACCGAAGAAGTACTGCTGCTGCTGAAGATGGATGTGTGAATGTTCATGTTCCAATCATCAATGGGTTGCCATCATCTTAA 1206 0.4726 MLSSETLDLTSNNTSTTHNTIDTNTKTPPPPTQPTNTPKSLSFTTVTLKRLPHLHPTTTAATTNNTMNVISYKECLKNHAASIGGHALDGCGEFMASSSTNPTDPLSLKCAACCCHRNFHRRDPPEPSTTTPTKNNPNFPNCFYSPPPPPPPPPSSATTTTTTAPPPLPPQPLPHRTKRQSTSPSLSSSPSHSPSPISSPSSPPPLSHVPPSYHHHHHHHRHSSAPHHRLFSLGNAYSVVASLPSSDHHHELNRNNNFNNNNNSKKRHRTKFSQEQKEKMYRFSEKLGWRMQKGDDDGSVQEFCNEIGVPRGVFKIWMHNNKNTFNKIKRSDGIIDGGNNPQNNNNIDDHHHKINDNNEDGGGIDHHDDNNSDEIHRRSTAAAEDGCVNVHVPIINGLPSS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1919 401 MobiDBLite consensus disorder prediction 175 195 - -
Aev07g1919 401 Gene3D - 251 327 - -
Aev07g1919 401 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 265 323 IPR006455 -
Aev07g1919 401 MobiDBLite consensus disorder prediction 246 277 - -
Aev07g1919 401 MobiDBLite consensus disorder prediction 121 227 - -
Aev07g1919 401 MobiDBLite consensus disorder prediction 125 140 - -
Aev07g1919 401 SUPERFAMILY Homeodomain-like 255 327 IPR009057 -
Aev07g1919 401 MobiDBLite consensus disorder prediction 332 373 - -
Aev07g1919 401 MobiDBLite consensus disorder prediction 211 227 - -
Aev07g1919 401 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 57 330 - -
Aev07g1919 401 Pfam ZF-HD protein dimerisation region 70 123 IPR006456 -
Aev07g1919 401 MobiDBLite consensus disorder prediction 196 210 - -
Aev07g1919 401 MobiDBLite consensus disorder prediction 1 26 - -
Aev07g1919 401 MobiDBLite consensus disorder prediction 141 174 - -
Aev07g1919 401 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 72 123 IPR006456 -
Aev07g1919 401 MobiDBLite consensus disorder prediction 346 373 - -
Aev07g1919 401 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 9 57 330 - -
Aev07g1919 401 MobiDBLite consensus disorder prediction 1 39 - -
Aev07g1919 401 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 72 123 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1919 Aev-Chr7 20248498 20249703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1919 56 325 ZF-HD Transcription Factor Family AT1G69600 42.066 2.43e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aev07g1919 ZF-HD_dimer 6.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1919 - - gmx:100814924 247.284