Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1899 ATGTCTAAGAAACACAGAAAGCTTTTCCCCACAAACCAAACCCAAGATTGTTCTGGCTTTTGTGACCCTGCTTGCCCTTATAACTGTTACTCTTACCCTGACTACTATTTCTCTCCACCACCACCACCCATTTCATCCAATGACCATTCTACTAACATTAACCACATCTCATCCTACTTAATCATCCTTGTTTCACTATTCGCAGTTATTTTTATTGTTGTTGGGTTCTATGTGATCAAATTAAAGTGTTATGCTGATTGGTGTGGATTTAGAAGAGTCAACGACTCTGTTCAATCTCAATCAAACAACTCTGAGGATGAGTTTCTCAATGAGAATCAAGTTGATCACCCCGTTTGGCTCATAACAACAATTGGTTTACAACAATCAATCATAAATTCTATCTCTATCTGCAAATATAGAAAAGATGAAGGGTTAATTGAAGGTACAGAGTGTTCTGTTTGCTTGAACGAGTTTCAAGAAGGAGAAACATTAAGACTCTTGCCTAAGTGTAATCATGCTTTTCACATTCCTTGTATCGACACATGGTTAAGGTCTCATACTAATTGTCCTCTCTGTAGAGCTTGTATTGTCTCTAACAACGTTGTTTCAGAGGCATTCGTGTCGAATTTGGATTCGGTTGAGCAAGAGAATAATTCAAATTCAGGAAGAAATCAAGATCAGAACATGTTGGGTGACAATGTTGTGACCAATTTGGCCTTGGAAAATAGTGATGGAACAGGGGAAGCAAGTGAGGTACTAGAGTTAATTGATGAATCGTGTTTTAAGGAGCGATTAAATGTAAATAATGATCAAATTGAGGATCAAGGGGTTCAATCTGTTTCTTCTGTTGCAAATTCTTGTTCTAGAGAATCTGAAATTCATGTCATTGATCATATTGAGGATGACACAGAGTTGCAGATTGTTAGTGTTTCTAAGGAAGGTGGTGATGAATGTAAGACAAGTGGAACAATGTTGCGTCGTTCGTCCATTGAAGAGTGCTTGCATTTAAGTCCTGTTTCTATGAAAAGGTCAGTATCTTGCAGTGGAAGGATTTTGTATGCAAGAGGTTAA 1071 0.3772 MSKKHRKLFPTNQTQDCSGFCDPACPYNCYSYPDYYFSPPPPPISSNDHSTNINHISSYLIILVSLFAVIFIVVGFYVIKLKCYADWCGFRRVNDSVQSQSNNSEDEFLNENQVDHPVWLITTIGLQQSIINSISICKYRKDEGLIEGTECSVCLNEFQEGETLRLLPKCNHAFHIPCIDTWLRSHTNCPLCRACIVSNNVVSEAFVSNLDSVEQENNSNSGRNQDQNMLGDNVVTNLALENSDGTGEASEVLELIDESCFKERLNVNNDQIEDQGVQSVSSVANSCSRESEIHVIDHIEDDTELQIVSVSKEGGDECKTSGTMLRRSSIEECLHLSPVSMKRSVSCSGRILYARG* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1899 356 CDD RING-H2_PA-TM-RING 150 193 - -
Aev07g1899 356 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 10 352 IPR044675 -
Aev07g1899 356 SUPERFAMILY RING/U-box 141 198 - -
Aev07g1899 356 ProSiteProfiles Zinc finger RING-type profile. 151 193 IPR001841 -
Aev07g1899 356 Pfam Ring finger domain 150 193 IPR001841 -
Aev07g1899 356 SMART ring_2 151 192 IPR001841 -
Aev07g1899 356 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 202 IPR013083 -
Aev07g1899 356 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 10 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1899 Aev-Chr7 20094844 20095914 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1899 3 286 C3H Transcription Factor Family AT1G72220 40.483 2.68e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1899 - - aprc:113847030 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1899 07 20094844 20095914 Aev07g1899 07 20094844 20095914 ECH