Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1898 ATGGCCTTAGAAGCTGTGGTTTTCCCACAAGATCCACTTTCTTATGGTTGCAAGGACAATTATTTGTACACCTTAATTGGAGGAGGAAGTAGTAGTGCAAATTGGAACACCCATTTCCAAGCATCAGAAGATAATAAAGAGAAAAATGTTAATGATTCGTTTATTGGAGTTGTGAACAATAACATAATAGAACAGAGTATAAATGCGAATTGGGACTCTGTTTCTTCTTCCTCTCCGGAGTCACTATCTGGAGGAGCTAGTTTCTCTGTTCCTCCTTCGTCCTCCTCCGTGGAAGCCACCGTGACAGCCGAAGTTTCCGCCGCAACCACGGGCCGCCGTAAACGGCGTCGGACGAAGAGCGTGAAGAACAAGGAGGAAATTGAGAACCAGAGGATGACCCACATTGCAGTTGAGCGCAATCGAAGGAAACAAATGAATGAGTACCTCGCTGTACTCAGATCCCTCATGCCTCCTTCTTATGTGCAAAGGGGTGACCAAGCGTCCATTATTGGAGGCGCAATCAACTTTGTGAAAGAGCTAGAACAGCTTCTCCAATGCATGAAGAGCCAAAAGAAGAAAAATCATCAACTACAACAACAAGCGCAGAAGGAGGAGAACAATAATAACAATAATACTAATGACGATTTAACTGCCTTTGCTGAGTTCTTCATGTTTCCTCAGTACTCGACGCGTGAAACAACTCATAACTGCAAGAACAAAGTGTACCCTGCCACAAGCAGCACAAGTGAGGAGGTGATGATGATGATGATGCAACAAGAGAACAAATCATTGGCCGTAGCAGATATAGAAGTGTCCTTAGTGGATAGCCATGCCAACATGAAGATACTATCAAAGAAGCAACCAGGGTTGTTTGTGAAGATGGTTGTTGGGTTACAGACTCTTGGATTCACCATTCTTCACCTTAATGTTACCCGTGCGAACGATATGGTCCTTACCTCAGTTACCGTCAAGGTAGAGGAAGAGTGTCAGCTGAATACAGTGGATGAAATCGCAGCCGCAGTGAATCAACTATTACGCACAATTCATGAGGAAGTTGCTTTCAGCGCTGATTAA 1074 0.4413 MALEAVVFPQDPLSYGCKDNYLYTLIGGGSSSANWNTHFQASEDNKEKNVNDSFIGVVNNNIIEQSINANWDSVSSSSPESLSGGASFSVPPSSSSVEATVTAEVSAATTGRRKRRRTKSVKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPSYVQRGDQASIIGGAINFVKELEQLLQCMKSQKKKNHQLQQQAQKEENNNNNNTNDDLTAFAEFFMFPQYSTRETTHNCKNKVYPATSSTSEEVMMMMMQQENKSLAVADIEVSLVDSHANMKILSKKQPGLFVKMVVGLQTLGFTILHLNVTRANDMVLTSVTVKVEEECQLNTVDEIAAAVNQLLRTIHEEVAFSAD* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1898 357 Coils Coil 180 214 - -
Aev07g1898 357 MobiDBLite consensus disorder prediction 194 213 - -
Aev07g1898 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 129 180 IPR011598 GO:0046983
Aev07g1898 357 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 1 353 - -
Aev07g1898 357 SMART finulus 135 186 IPR011598 GO:0046983
Aev07g1898 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 199 IPR036638 GO:0046983
Aev07g1898 357 CDD bHLH_AtFAMA_like 132 199 - -
Aev07g1898 357 Pfam Helix-loop-helix DNA-binding domain 130 181 IPR011598 GO:0046983
Aev07g1898 357 Gene3D - 119 212 IPR036638 GO:0046983
Aev07g1898 357 MobiDBLite consensus disorder prediction 99 125 - -
Aev07g1898 357 PANTHER MAX DIMERIZATION, MAD 1 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1898 Aev-Chr7 20077570 20081380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1898 1 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 43.235 1.13e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev07g1898 HLH 7.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1898 - - gmx:100797856 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1898 07 20077570 20081380 Aev07g1898 07 20077570 20081380 ECH