Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1872 ATGGCAGCTGCAATGAATCTATACTCACAGGTTCAGTCAGATTCTTTCAGTGGTGGTGAACTAATGGAAGTTCTTGAACCTTTTTTCAAAAGTTCTTCCACAACAACCACCACCTCTTCTCTAACCCCAAATTCAATCCTACCTTCAACTTCTACCTCAATTTCTTCTTATCCTTCTCCTTCTCCTTCTCCTTCTCCTTTACCTACCTACTTCTATTCCTCTCCTTCAACTCTCCCTCCACAGCCTAATTTCCCCACAGATTGTTGCTCCACAACAATGACCCCTCTATTCCCTTCAGGGTTATCCAACAGCCAAAATTTCATAGGCTTTGAGCAACCAAGTTCTGTTTTTGGGTTCAACTACAGCCACATAACCCAATCTCAAATTGACCAGATCCAGGCCCAGGCCCAGGCCCAAGCCCATATCCAGGCCCAAGATGATCTGAACAACACTAACAACAACACCAACACACTCAGCTTCCTATGTCCCAAGCCTGTCCCCATGAAGCAAGTGGGGGCACCCCAAAAGCCCACCAAGCTCTACAGAGGGGTGAGGCAGAGACATTGGGGGAAATGGGTAGCTGAGATTAGACTCCCAAAGAACCGTACAAGGCTTTGGCTTGGAACTTTTGACACTGCTGAGGAAGCTGCAATGGCTTATGACATGGCAGCTTATAAGCTCAGAGGTGAATTTGCAAGGCTCAATTTCCCACATCTGAAGCACAATGGTTCATGTGTTAATGGTGCTTTTGGGCAGTACAAGCCCCTTCATTCTACCGTTGATGCAAAACTTGATGCTATATGTGCTGAGATGCAGAAACAGGGGAATCAAGATAAGCCTATTAAGTCTTCAAGGAAGTCAAAAATTGGTCCAAAGGATGATGAAAGCAATAATAAATGCAATGTAGAAATTGTTGCTGGTTCGAGTGAGGTCTCTGAAGATTCTTCTCCTCTTTCAGATCTTACATTTGATGATGTCAATGAGTCACAGTGGGATGCTGCTTCAGAACATTTTAATCTGCAGAAGTTCCCATCTTATGAGATTGATTGGGATTCTCTGTGA 1062 0.4435 MAAAMNLYSQVQSDSFSGGELMEVLEPFFKSSSTTTTTSSLTPNSILPSTSTSISSYPSPSPSPSPLPTYFYSSPSTLPPQPNFPTDCCSTTMTPLFPSGLSNSQNFIGFEQPSSVFGFNYSHITQSQIDQIQAQAQAQAHIQAQDDLNNTNNNTNTLSFLCPKPVPMKQVGAPQKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDMAAYKLRGEFARLNFPHLKHNGSCVNGAFGQYKPLHSTVDAKLDAICAEMQKQGNQDKPIKSSRKSKIGPKDDESNNKCNVEIVAGSSEVSEDSSPLSDLTFDDVNESQWDAASEHFNLQKFPSYEIDWDSL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1872 353 MobiDBLite consensus disorder prediction 273 299 - -
Aev07g1872 353 SUPERFAMILY DNA-binding domain 180 238 IPR016177 GO:0003677
Aev07g1872 353 PRINTS Ethylene responsive element binding protein signature 181 192 IPR001471 GO:0003700|GO:0006355
Aev07g1872 353 PRINTS Ethylene responsive element binding protein signature 203 219 IPR001471 GO:0003700|GO:0006355
Aev07g1872 353 CDD AP2 179 239 IPR001471 GO:0003700|GO:0006355
Aev07g1872 353 MobiDBLite consensus disorder prediction 33 58 - -
Aev07g1872 353 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 352 - -
Aev07g1872 353 MobiDBLite consensus disorder prediction 279 299 - -
Aev07g1872 353 Pfam AP2 domain 181 230 IPR001471 GO:0003700|GO:0006355
Aev07g1872 353 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 352 - -
Aev07g1872 353 SMART rav1_2 180 243 IPR001471 GO:0003700|GO:0006355
Aev07g1872 353 ProSiteProfiles AP2/ERF domain profile. 180 237 IPR001471 GO:0003700|GO:0006355
Aev07g1872 353 MobiDBLite consensus disorder prediction 33 61 - -
Aev07g1872 353 Gene3D AP2/ERF domain 180 238 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1872 Aev-Chr7 19822499 19823560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1872 1 353 AP2-EREBP Transcription Factor Family AT1G78080 47.733 2.88e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev07g1872 AP2 3.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1872 K09286 - gmx:100800478 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1872 07 19822499 19823560 Aev08g1028 08 6174652 6175815 PCT