Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1863 ATGGGACGTGTTAAACTTGAGATAAAGAGAATAGAGAACACCACGAATCGACAAGTTACTTTCTCAAAGCGTAGGAATGGCCTCATTAAAAAGGCTTATGAGTTATCTATCTTATGTGACATTGATGTTGCTCTTATAATGTTTTCTCCATCAGGGCGTCTGAGTAACTTTTCTGGTAGAAGGAGGATCGAAGATGTTTTTACCCGTTACCTTAATCTTCCTGACCAAGAAAGAGACAGTGCTGTATGTTTTCCTGAGCCACCTTATCGCAGGGCTGTGCAGAACAAGGAGAATTCGGTGCTATGGAGGATAAAAGGGAAGGGTTTGCTGAGTGGAGCGGGGAGCGGAGCTGAGAGGAGGATGGAGGAGGAGGCTAAGACAGTGAAGAAGGCCTTCCGATTCGATTCTGTAATTTTTCTAGGGTTCGATGATGTTGTTGATGGTGTTGCAGCAGAGGATGAAGCTAGAAGTGAAATCAACCATGATATTTCACTTGCAACTGTGGACAATGCTCTATATTCTGCCTCTGTGGATGATTTACTCACCACTTGTTTCTTCTTTGTATTCCATGAAATGAGGGAATCTCCCAAGAAAACCATGAAACCTGTTGTGGAGCGGCGAGTGTCTGTACACCCGGCCCAGTCCACATCAGCAAGTAAAGCTTTCAAGGAGATATTGGACTTAGATGAAAACAGAATAGATTTTCCTGGAGTTGCCTTAAGGTATCGAAGGAGGTGA 738 0.4377 MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDVALIMFSPSGRLSNFSGRRRIEDVFTRYLNLPDQERDSAVCFPEPPYRRAVQNKENSVLWRIKGKGLLSGAGSGAERRMEEEAKTVKKAFRFDSVIFLGFDDVVDGVAAEDEARSEINHDISLATVDNALYSASVDDLLTTCFFFVFHEMRESPKKTMKPVVERRVSVHPAQSTSASKAFKEILDLDENRIDFPGVALRYRRR* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1863 245 Gene3D - 13 84 IPR036879 GO:0003677|GO:0046983
Aev07g1863 245 CDD MADS_MEF2_like 2 75 IPR033896 GO:0000977|GO:0045944
Aev07g1863 245 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Aev07g1863 245 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Aev07g1863 245 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Aev07g1863 245 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Aev07g1863 245 SUPERFAMILY SRF-like 2 79 IPR036879 GO:0003677|GO:0046983
Aev07g1863 245 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 79 - -
Aev07g1863 245 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL104 1 79 - -
Aev07g1863 245 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Aev07g1863 245 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Aev07g1863 245 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1863 Aev-Chr7 19713453 19725807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1863 1 104 Type I MADS-box Gene Family AT1G22130 77.885 4.41e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Aev07g1863 SRF-TF 5.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1863 - - gmx:100305913 177.948