Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1831 ATGCCGCCATCGCAGCCCCGCCGCCTGCCGCCGCCGCAGGCCGCCCGTCTGGACCCCAAAATCTGGCGAGCCTGCGCCGGCGCCGCCGTGGAGATCCCTGCCGTGCATTCTAGGGTTTACTACTTCCCACAGGGTCACCTCGAACAAGCCTTCCCTCCCTCTCTTCACCACCACAACCACCACCTCTCCCCTCTCCTCCGCCCCCTCCCCTTCGTCCTCTGCCGCGTCTCCTCCGTTCAATTCCTCGCTGATCCCCTTTCCGACGAGGTATTTGCCAAGCTCCTCCTCAATCCTATCGCCGCCGATTGTGGCTCCGGCGAACACCCGGCCGAGGAGCCTGACGCCGGCGACAAGGTCTCCTCCTTCGCAAAGATTCTGACCCCTTCGGATGCCAACAATGGCGGCGGGTTTTCCGTCCCGAGGTACTGCGCTGACTCCATTTTCCCGGCGCTCGACTTCAACGCTGACCCACCGGTGCAGGTCCTTACAATCACCGACGTCCACGGCACAGCCTGGGAGTTCCGCCATATCTACCGCGGGACGCCCCGCCGCCATCTTCTCACCACTGGGTGGAGCAAGTTCGTGATCCACAAGAAGCTCGTTGCCGGAGATTCCGTTGTCTTTATGAGGAACTCCCAGGGCTCCATTTTTGTTGGCATTCGCCGGACCTTGCGATTCTCCACGGGTGTCATGGCGGAGAATCGCGAGCCGTGGCAGCAGCAGCAGCAGCAAGAGGGGCACGCTGGTGGCAGCAGCGCTTCTCTGGTTATTCCTAGGGACGGGAGGGGGAAAGTGTCGGTGAAGGATGTGGCTCACGCTGCAGAATTGGCGGCTAGGAATGTGCCATTTGAGGTGGTTTATTATCCGAGGGTCGGGTGGTCGGACTTTGTGGTGAAGGCTGAGGCTGTGGAGGGAGCAATGAAGGCAGCTTGGTGTCCTGGAATGAGAGTGAAGATGGCTGTGGAGACAGAGGATTCTTCCAGGATGACTTGGTTTCAGGGGACAGTGTCTTCTGCTTCTGCTCCTGACAATGGGCCTTGGAGGGGTTCTCCTTGGCGCATGCTTCAGGTTACATGGGATGAAGCTGAAGTCTTGCAGAATGCAAAGCGAGTCAGTCCTTGGCAGGTTGAACTTATTTCTCCGACACCTTCACTTCATACTGCGTTTCCTCCAATGAAAAAGCTTAGAGCTGCTCAGGGTTCTGGAGTGCTAAGTGATAGAGAGGGAGAGCCCTTCTTTCCTATGACAGTGTTAACTAATTCAACAATGGAAAACCTAAATGAAACATTGTTGAGTTATGAAACTTTTCCTGCTGGCATGCAGGGAGCCAGGCATGATTTATTTTCTGTATCAACTTTTTCCAACCTTTTAAATGATAACTCTCATCTGCGTATGGGTAGTAGTTTCTTTGGGAACAATACCGGGCTTAGGTTGAATACAGTGTCAACTGAGCTAAACATTGGAAGTTGTCAATCTAGCGACTTGTCACTAGATAGCCCGAGTAGTTTGCATTCATTTGGCCTAGAGTCTGGTGGGACCAACAACTGTAACATCTCAAAAGTTGGTTCTGGTTCAATTCAGCTGTTTGGTAAGATAATAAAACCTGTGGAAATTGAGTTGCATGATGCTAGTTGCATGGGAGATGATGGATGCTTGATGCAGAAAGCCAACGACCCTCACCAGTTGAGGCATGTTATCTGTGAAGTTGTTTGGAGATATGTAGCTGTACAGGTTCTTAATGTACGCATGCAGACAGAAGCTGACTATGCTTTTGACCTTTTAGTAGTAAACTTGTAA 1797 0.5298 MPPSQPRRLPPPQAARLDPKIWRACAGAAVEIPAVHSRVYYFPQGHLEQAFPPSLHHHNHHLSPLLRPLPFVLCRVSSVQFLADPLSDEVFAKLLLNPIAADCGSGEHPAEEPDAGDKVSSFAKILTPSDANNGGGFSVPRYCADSIFPALDFNADPPVQVLTITDVHGTAWEFRHIYRGTPRRHLLTTGWSKFVIHKKLVAGDSVVFMRNSQGSIFVGIRRTLRFSTGVMAENREPWQQQQQQEGHAGGSSASLVIPRDGRGKVSVKDVAHAAELAARNVPFEVVYYPRVGWSDFVVKAEAVEGAMKAAWCPGMRVKMAVETEDSSRMTWFQGTVSSASAPDNGPWRGSPWRMLQVTWDEAEVLQNAKRVSPWQVELISPTPSLHTAFPPMKKLRAAQGSGVLSDREGEPFFPMTVLTNSTMENLNETLLSYETFPAGMQGARHDLFSVSTFSNLLNDNSHLRMGSSFFGNNTGLRLNTVSTELNIGSCQSSDLSLDSPSSLHSFGLESGGTNNCNISKVGSGSIQLFGKIIKPVEIELHDASCMGDDGCLMQKANDPHQLRHVICEVVWRYVAVQVLNVRMQTEADYAFDLLVVNL* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1831 598 Gene3D - 119 224 IPR015300 -
Aev07g1831 598 SMART B3_2 122 224 IPR003340 GO:0003677
Aev07g1831 598 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 10 552 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev07g1831 598 CDD B3_DNA 121 222 IPR003340 GO:0003677
Aev07g1831 598 Pfam B3 DNA binding domain 122 222 IPR003340 GO:0003677
Aev07g1831 598 PANTHER AUXIN RESPONSE FACTOR 10 552 - -
Aev07g1831 598 ProSiteProfiles B3 DNA-binding domain profile. 122 224 IPR003340 GO:0003677
Aev07g1831 598 Pfam Auxin response factor 273 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev07g1831 598 Gene3D - 311 383 - -
Aev07g1831 598 SUPERFAMILY DNA-binding pseudobarrel domain 119 229 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1831 Aev-Chr7 19439434 19446649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1831 16 550 B3 DNA Binding Superfamily AT1G77850 48.825 9.04e-167 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev07g1831 B3 3.8e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1831 - - aip:107624033 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1831 07 19439434 19446649 Aev08g0998 08 5963174 5965766 PCT