Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1720 ATGTTCTTTTTTAGAATGGAATCTGGGGATGGAACTAGCAATAGTGATAATATGGAACGTGCTGAGCTGGGTCAGTGCTTGACTACCGAAGCTGTCAATCACAGAGTGGCAATGGCAGATGGGTTAGGTGTTATTGAAGGGCAATCTGGTCGAGGCGAATGTTTTCGAACTTATAAGAGGCGGATGCATGCTAAGATGAGTTGTCCAGAAAACAAAGTTCAGGATGACAGCAGAAAATGTGTGGATGCTGCAAGTCTCCGATCAGATCAGGCTGTGAAGAATCCATGTGATGTATCTGTAGGCAAAAGTTCAAAAGATTATTCAAATGGACATTGGGCAAATGTTGCACTGAAGTGTTTATATCATTCATTAGACAACGACAACAGTGGGATAGGGTGCTGCATAAGGGAAGCAATCATGAAAATTCCTAAAACCACTACAGACACGAAAACCTGTAAAATTGATAAAGATGGTCAAGATTGCTCTTCGCAGATTGAGTGGTTCTCTCATAGGTCACTGAGCAAATCCTATAAGCATGCAGATGTAATGCATGATGGATGTTCTAGTGAATCAGATGGCAATGATGTGACTAAGAAGTGTGAGCGTGTGATCTGTAATATCTTAGCCTCAGAGGAATTCAATTCATTATGCATGGTGCTGTTTGAAAATTTTCAAGGAATGAAGCCTGAAAGTGTATTTGACCTTAGTGTCATAAAATCAAGGATGGCAGAGCATGAATATGAACAATCACCTACACTTTTCTTGTCAGATATTCAACAGGTTTGGAGAAAGCTTCAAGACGTCGGAAATGAGATTGTTGCTATTGCCAAGAGGCTCTCTAGCATGTCATGTGCTTCCTATTGTGACCAAGTGGGAGATTCAGCACACAGCTCATTTGAAGATGAAAAACAAGTGTTCTGTAACCAGGCATTGGACTCTGACACAAAACCACAGCAGACAGAAGAATGTGTTATGAATAAATTTTGCACTTGCAGGCACTGTGGAGGTAGGGCAGATGGAACAGACTACTTGATTTGTGATTCATGTGAGGAGATATACCATGTGTCCTGTATTGGTATTGAGCGTGCTGCGAAAGAAATACTCGATAAAAGCTGGTTTTGTGCCACTTGTATAGGATCTCCTCATGACAATTGTGTGGTGTGTGAAAGGTCGAATGTCCCAAAGTCCTTGAACAACACTGGTGTTGAGGAAAGCACACCTACAAATCATGAAACACTAAATGAGTTGCAAGAGAATTCAAATTGTACCTTCGATGGGATTCAGGTGTCCATAGGTGGGAGAAACTCACCTGATTGCAAAATTTGTGGTGAGGAGATCGGTGGTGAAAATATGAAAAAATGTGGCCACCTTTATTGCCCCAATAAGTTCTTCCATGTAAGGTGTTTGTCAAGTAAACAGCTCAAGTCACATGGTCCTTGTTGGTACTGTCCTTCTTGTTTATGCAGAGTTTGTCTCAGGGATAAAGATGATGATAAGATTGTTCTCTGTGATGGGTGTGATAATGCATACCACATCTATTGCATGGAACCTCAACTAACTTCTATTCCAAGAAGAAAATGGTTCTGCAGAAAATGTGATGCCGGGATCCAAGCAATCCGCCTGGCGGAAAAGAAATATGCTAATGACAAGTGTAGAGCTGGTAAAAATGTTTCGAGATCGAATGATAAGCTCGGTAAGAAAAGGAAACAAGTAGAAGAGTTAGACAAAGATGAAGGAATGGATATGCTTTTAACTGCAGCCAATACTCTTAACTTTGAAGAGAACTTAGCTACAGGCCAGATTGAGTCATAA 1812 0.4089 MFFFRMESGDGTSNSDNMERAELGQCLTTEAVNHRVAMADGLGVIEGQSGRGECFRTYKRRMHAKMSCPENKVQDDSRKCVDAASLRSDQAVKNPCDVSVGKSSKDYSNGHWANVALKCLYHSLDNDNSGIGCCIREAIMKIPKTTTDTKTCKIDKDGQDCSSQIEWFSHRSLSKSYKHADVMHDGCSSESDGNDVTKKCERVICNILASEEFNSLCMVLFENFQGMKPESVFDLSVIKSRMAEHEYEQSPTLFLSDIQQVWRKLQDVGNEIVAIAKRLSSMSCASYCDQVGDSAHSSFEDEKQVFCNQALDSDTKPQQTEECVMNKFCTCRHCGGRADGTDYLICDSCEEIYHVSCIGIERAAKEILDKSWFCATCIGSPHDNCVVCERSNVPKSLNNTGVEESTPTNHETLNELQENSNCTFDGIQVSIGGRNSPDCKICGEEIGGENMKKCGHLYCPNKFFHVRCLSSKQLKSHGPCWYCPSCLCRVCLRDKDDDKIVLCDGCDNAYHIYCMEPQLTSIPRRKWFCRKCDAGIQAIRLAEKKYANDKCRAGKNVSRSNDKLGKKRKQVEELDKDEGMDMLLTAANTLNFEENLATGQIES* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1720 603 SUPERFAMILY FYVE/PHD zinc finger 320 380 IPR011011 -
Aev07g1720 603 ProSiteProfiles Zinc finger PHD-type profile. 326 380 IPR019787 -
Aev07g1720 603 PANTHER D4, ISOFORM A 115 594 - -
Aev07g1720 603 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 430 538 IPR013083 -
Aev07g1720 603 SMART PHD_3 488 533 IPR001965 -
Aev07g1720 603 SMART PHD_3 438 487 IPR001965 -
Aev07g1720 603 SMART PHD_3 330 378 IPR001965 -
Aev07g1720 603 SUPERFAMILY FYVE/PHD zinc finger 487 536 IPR011011 -
Aev07g1720 603 PANTHER HISTONE ACETYLTRANSFERASE 115 594 - -
Aev07g1720 603 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 310 384 IPR013083 -
Aev07g1720 603 ProSitePatterns Zinc finger PHD-type signature. 329 377 IPR019786 -
Aev07g1720 603 ProSiteProfiles Zinc finger PHD-type profile. 485 535 IPR019787 -
Aev07g1720 603 Pfam PHD-finger 331 378 IPR019787 -
Aev07g1720 603 Pfam PHD-finger 488 533 IPR019787 -
Aev07g1720 603 ProSiteProfiles Zinc finger RING-type profile. 439 486 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1720 Aev-Chr7 18094197 18105083 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1720 487 555 C2H2 Transcription Factor Family AT3G01460 40.580 2.49e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev07g1720 PHD 1.7e-13 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1720 - - gmx:100810450 697.197