Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1717 ATGGCAGCACCAACAACGCTAGAGGAAGTTCGAACCCTGTGGATAGGTGACCTACAGTATTGGGTAGACGAGTCCTACCTGACCCACTGCTTTGCCCACACAGGCGACGTCGTTTCCATCAAAATCATCCGAAACAAAATCACTGGCCACCCTGAAGGCTACGGCTTCGTCGAGTTCGTTTCCCACGCAGCCGCTGAGCGCGTGCTCCACACATACAACGGCACCCCTATGCCCGGCACCGAACAGAACTTTAGGCTCAATTGGGCCTCCTTCGGTGTCGGCGAGCGCCGGCCTGATTCTGGGCCCGACCACTCCATCTTCGTCGGTGACCTTGCCCCTGACGTCACTGATTATCTTCTCCAGGAGACTTTCCGAAACGTTTACCCTTCCGTTAGGGGCGCTAAGGTCGTTACGGACCCTAACACGGGCCGATCCAAGGGCTACGGGTTCGTTAAATTCTCTGATGAGAATGAGAGGAACCGGGCCATGACTGAGATGAATGGGGTTTATTGCTCCACCAGGCCCATGCGTATTAGCGCTGCTACACCTAAGAAGACCACCGGTTTTCAACAGCAATATGCTCCTCCTAAAGCAATCTATCCAGTTCCAGCGTACACCACTCCAGTGAGTGCAGTTCCACCAGAATATGATATGAATAATACTACGGTTTATGTTGGTAATTTGGATGTCAATGTCACAGAGGATGAGCTGAAGCAAAGCTTTATGCAATTTGGAGATATTGTGTCTGTCAAAGTTCATGCTGGCAAAGGATTTGGTTTTGTTCAGTATGGAGCTAGAGCATCTGCCGAAGAAGCCATTCAGAAGATGCAGGGGAAGATGATAGGTCAACAAGTGATTCAACTTTCTTGGGCTAGTACCACTAGACAGGACTTAGCTGGTGGTTGGGGGCCACAGGTGGATCAAAATCAATGGAGTGCCTACTACGGCTACGGACAGGGTTATGACGCCTACACTTATGGAGCTGCTACCCAAGATCCTTCCCTGTATGCTTATGGTTCATATGCTGGTTATACACAATACCCTCAACAGGTTGAAGGTTCTCAAGATGTTTCAGCTGTGTCTCTTCCTTCGGAAGAGTTGTATGATCCCCTGGCTATGCCTGATGTTGATAAGTTAAATGCTGCATATCTCTCGGTACATGGAAATGCCATTTTAGGACGGTCTCTTTGGCAGAAAACCTCACCATTCCTACAGCAAGCTTAG 1224 0.4959 MAAPTTLEEVRTLWIGDLQYWVDESYLTHCFAHTGDVVSIKIIRNKITGHPEGYGFVEFVSHAAAERVLHTYNGTPMPGTEQNFRLNWASFGVGERRPDSGPDHSIFVGDLAPDVTDYLLQETFRNVYPSVRGAKVVTDPNTGRSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAPPKAIYPVPAYTTPVSAVPPEYDMNNTTVYVGNLDVNVTEDELKQSFMQFGDIVSVKVHAGKGFGFVQYGARASAEEAIQKMQGKMIGQQVIQLSWASTTRQDLAGGWGPQVDQNQWSAYYGYGQGYDAYTYGAATQDPSLYAYGSYAGYTQYPQQVEGSQDVSAVSLPSEELYDPLAMPDVDKLNAAYLSVHGNAILGRSLWQKTSPFLQQA* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1717 407 PANTHER POLYADENYLATE-BINDING PROTEIN RBP45A-RELATED 3 350 - -
Aev07g1717 407 SUPERFAMILY RNA-binding domain, RBD 102 293 IPR035979 GO:0003676
Aev07g1717 407 CDD RRM2_SECp43_like 103 182 - -
Aev07g1717 407 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 221 293 IPR000504 GO:0003723
Aev07g1717 407 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 3 350 - -
Aev07g1717 407 Gene3D - 90 192 IPR012677 -
Aev07g1717 407 SMART rrm1_1 222 289 IPR000504 GO:0003723
Aev07g1717 407 SMART rrm1_1 12 87 IPR000504 GO:0003723
Aev07g1717 407 SMART rrm1_1 105 179 IPR000504 GO:0003723
Aev07g1717 407 Gene3D - 209 298 IPR012677 -
Aev07g1717 407 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 11 91 IPR000504 GO:0003723
Aev07g1717 407 CDD RRM1_SECp43_like 12 92 - -
Aev07g1717 407 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 223 286 IPR000504 GO:0003723
Aev07g1717 407 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 81 IPR000504 GO:0003723
Aev07g1717 407 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 106 171 IPR000504 GO:0003723
Aev07g1717 407 Gene3D - 10 89 IPR012677 -
Aev07g1717 407 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 104 183 IPR000504 GO:0003723
Aev07g1717 407 SUPERFAMILY RNA-binding domain, RBD 7 79 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1717 Aev-Chr7 18050033 18053473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1717 102 299 Eukaryotic Initiation Factors Gene Family AT1G71770 28.571 1.52e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1717 - - cam:101496574 664.07